LOCUS BC137082 3494 bp mRNA linear HUM 11-FEB-2009 DEFINITION Homo sapiens thioredoxin domain containing 16, mRNA (cDNA clone MGC:168702 IMAGE:9021079), complete cds. ACCESSION BC137082 VERSION BC137082.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3494) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3494) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Ambion cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: LLDM Plate: 672 Row: d Column: 5 single stranded. FEATURES Location/Qualifiers source 1..3494 /db_xref="H-InvDB:HIT000501050" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:168702 IMAGE:9021079" /tissue_type="Testicle, PCR rescued clones" /clone_lib="NIH_MGC_382" /lab_host="DH10B" /note="Vector: pCR4-TOPO with reversed insert; Clone identification sequence tag: TACGTTGC" gene 1..3494 /gene="TXNDC16" /db_xref="GeneID:57544" /db_xref="HGNC:HGNC:19965" CDS 330..2807 /gene="TXNDC16" /codon_start=1 /product="thioredoxin domain containing 16" /protein_id="AAI37083.1" /db_xref="GeneID:57544" /db_xref="HGNC:HGNC:19965" /translation="MFSGFNVFRVGISFVIMCIFYMPTVNSLPELSPQKYFSTLQPGK ASLAYFCQADSPRTSVFLEELNEAVRPLQDYGISVAKVNCVKEEISRYCGKEKDLMKA YLFKGNILLREFPTDTLFDVNAIVAHVLFALLFSEVKYITNLEDLQNIENALKGKANI IFSYVRAIGIPEHRAVMEAAFVYGTTYQFVLTTEIALLESIGSEDVEYAHLYFFHCKL VLDLTQQCRRTLMEQPLTTLNIHLFIKTMKAPLLTEVAEDPQQVSTVHLQLGLPLVFI VSQQATYEADRRTAEWVAWRLLGKAGVLLLLRDSLEVNIPQDANVVFKRAEEGVPVEF LVLHDVDLIISHVENNMHIEEIQEDEDNDMEGPDIDVQDDEVAETVFRDRKRKLPLEL TVELTEETFNATVMASDSIVLFYAGWQAVSMAFLQSYIDVAVKLKGTSTMLLTRINCA DWSDVCTKQNVTEFPIIKMYKKGENPVSYAGMLGTEDLLKFIQLNRISYPVNITSIQE AEEYLSGELYKDLILYSSVSVLGLFSPTMKTAKEDFSEAGNYLKGYVITGIYSEEDVL LLSTKYAASLPALLLARHTEGKIESIPLASTHAQDIVQIITDALLEMFPEITVENLPS YFRLQKPLLILFSDGTVNPQYKKAILTLVKQKYLDSFTPCWLNLKNTPVGRGILRAYF DPLPPLPLLVLVNLHSGGQVFAFPSDQAIIEENLVLWLKKLEAGLENHITILPAQEWK PPLPAYDFLSMIDAATSQRGTRKVPKCMKETDVQENDKEQHEDKSAVRKEPIETLRIK HWNRSNWFKEAEKSFRRDKELGCSKVN" BASE COUNT 1142 a 635 c 703 g 1014 t ORIGIN 1 ctttgcaggt tggcgaagtg gttccaggct acccggctag tctggcacgg ccccgtcttc 61 tgcctcctcc tccgtcgcgt ggcggcggga actgttggcc gcgcggcctc gggaacggcc 121 caggtccccg cccgcaggtc ccgggcagat aacatagatc atcagtagaa aacttcttga 181 agttgttcaa gaaaaatttg aaagtagcaa aatagaaaat aaagaattaa cagcagatac 241 agaggacagc atggaagtgt tgtcttagga aacagaacac agcagtgaaa aaacagacaa 301 aatccgctca gatacaactg cagctgataa tgttttccgg cttcaatgtc tttagagttg 361 ggatctcttt tgtcataatg tgcatttttt acatgccaac agtaaactct ttaccagaac 421 tgagtcctca gaaatatttt agtacattgc aaccaggaaa agcctcttta gcttattttt 481 gtcaagctga ttccccaaga acatctgtat ttcttgaaga actgaatgag gctgttagac 541 ctctgcagga ctatggaatt tcagttgcca aggttaattg tgtcaaagaa gaaatatcaa 601 gatactgtgg aaaagaaaag gatttgatga aagcatattt attcaagggc aacatattgc 661 tcagagaatt ccctactgac accttgtttg atgtgaatgc cattgtcgcc catgttctct 721 ttgctcttct ttttagtgaa gtgaaatata ttaccaacct ggaagacctt cagaacatag 781 aaaatgctct gaaaggaaaa gcaaatatta tattctcata tgtaagagcc attggaatac 841 cagagcacag agcagtcatg gaagccgctt ttgtgtatgg gactacatac caatttgtct 901 taaccacaga aattgccctt ttggaaagta ttggctctga ggatgtggaa tatgcacatc 961 tctacttttt tcattgtaaa ctagtcttgg acttgaccca gcaatgtaga agaacactaa 1021 tggaacagcc attgactaca ctgaacattc acctgtttat taagacaatg aaagcacctc 1081 tgttgactga agttgctgaa gatcctcaac aagtttcaac tgtccatctc caactgggct 1141 taccactggt ttttattgtt agccaacagg ctacttatga agctgataga agaactgcag 1201 aatgggttgc ttggcgtctt ctgggaaaag caggagttct actcttgtta agggactctt 1261 tggaagtgaa cattcctcaa gatgctaatg tggtcttcaa aagagcagaa gagggagttc 1321 cagtggaatt tttggtatta catgatgttg atttaataat atctcatgtg gaaaataata 1381 tgcacattga ggaaatacaa gaagatgaag acaatgacat ggaaggtcca gatatagatg 1441 ttcaggatga tgaagtggca gaaactgttt tcagagatag gaagagaaaa ttacctttgg 1501 aacttacagt ggaactaaca gaagaaacat ttaatgcaac agtgatggct tctgacagca 1561 tagtactctt ctatgctggt tggcaagcag tatccatggc atttttgcaa tcctatattg 1621 atgtggcagt taaactgaaa ggcacatcta ctatgcttct tactagaata aactgtgcag 1681 attggtctga tgtatgtact aagcaaaatg ttactgaatt tcctatcata aagatgtaca 1741 agaaaggcga gaacccagta tcttatgctg gaatgttagg aaccgaagat ctcctaaaat 1801 ttatccagct caacaggatt tcatatccag tgaatataac atcgatccaa gaagcagaag 1861 aatatttaag tggggaatta tataaagacc tcatcttgta ttctagtgtg tcagtattgg 1921 gactatttag tccaaccatg aaaacagcaa aagaagattt tagtgaagca ggaaactacc 1981 taaaaggata tgttatcact ggaatttatt ctgaagaaga tgttttgcta ctgtcaacca 2041 aatatgctgc aagtcttcca gccctgctgc ttgccagaca cacagaaggc aaaatagaga 2101 gcatcccact agctagcaca catgcacaag acatagttca aataataaca gatgcactac 2161 tggaaatgtt tccggaaatc actgtggaaa atcttcccag ttatttcaga cttcagaaac 2221 cattattgat tttgttcagt gatggcactg taaatcctca gtataaaaaa gcaatattga 2281 cactggtaaa gcagaaatac ttggattcat ttactccatg ctggttaaat ctaaagaata 2341 ctccagtggg gagaggaatc ttgagggcat attttgatcc tctgcctccc cttcctcttc 2401 ttgttttggt gaatctgcat tcaggtggcc aagtatttgc atttccttca gaccaggcta 2461 taattgaaga aaaccttgta ttgtggctga agaaattaga agcaggacta gaaaatcata 2521 tcacaatttt acctgctcaa gaatggaaac ctcctcttcc agcttatgat tttctaagta 2581 tgatagatgc cgcaacatct caacgtggca ctaggaaagt tcccaagtgt atgaaagaaa 2641 cagatgtgca ggagaatgat aaggaacaac atgaagataa atcggcagtc agaaaagaac 2701 cgattgaaac tctgagaata aagcattgga atagaagtaa ttggtttaaa gaagcagaaa 2761 aatcatttag acgtgataaa gagttaggat gctcaaaagt gaactaattt tatagggctg 2821 tggtttccaa aatttttttg gcatgataga cttaatttat ttccttaaag aataatatta 2881 aatcatttca agtttgcaga ctagtgccat ccaatagaat tataatataa gtcacatatt 2941 ttatttaaaa ttttctagta actacattaa acaaagtaaa agtgagcagg gcaaaataat 3001 tttgatatta cttttcaccc agtagtatac ccaaaatagc gaaatataga aattattaat 3061 gagatatttt acatcctttt ttgtaccaag tcttctaaat gcagtacata ttttatactt 3121 actgcatttc ttacttccga gtagccatat ttcaagtgtt ccttgccaca tgtggcctgt 3181 gactactgta ttggacagtt cagtactaga caaaaactag cataattaac ttagttctag 3241 ccatgatttc tatttggatt aaaattaaac tctaatcaca gttaactcca cagtgcattc 3301 atgcagctga cagttatatt tgttttattg gagtcatgat attaaaatca gcgtttgtca 3361 acctcagggg atatttagca attgtcggga gacatttttg atgtcatgac tagggcagtt 3421 attgacattt agtgagtaga ggccagggat cctgctaaat aacctgcatt ggacagcgcc 3481 ccacaacaaa gaat //