LOCUS BC135140 3172 bp mRNA linear SYN 02-SEP-2016 DEFINITION Synthetic construct Xenopus tropicalis RNA binding motif protein 5, mRNA (cDNA clone MGC:121130 IMAGE:7585789), complete cds. ACCESSION BC135140 VERSION BC135140.1 KEYWORDS MGC. SOURCE synthetic construct ORGANISM synthetic construct other sequences; artificial sequences. REFERENCE 1 (bases 1 to 3172) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 3172) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 3172) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (20-MAR-2007) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Richard M. Harland Laboratory, University of California, Berkeley cDNA Library Preparation: Richard M. Harland Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 247 Row: h Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 77683015. FEATURES Location/Qualifiers source 1..3172 /organism="synthetic construct" /mol_type="mRNA" /isolation_source="Xenopus tropicalis; Whole embryo, Tadpole (st. 36-41)" /db_xref="taxon:32630" /clone="MGC:121130 IMAGE:7585789" /clone_lib="NIH_XGC_tropTad5" /lab_host="E. coli XL1-Blue derivative, Stratagene ElectroTen-Blue" /note="Vector: pCS108" gene 1..3172 /gene="rbm5" /db_xref="GeneID:550032" CDS 121..2637 /gene="rbm5" /codon_start=1 /transl_table=11 /product="rbm5 protein" /protein_id="AAI35141.1" /db_xref="GeneID:550032" /translation="MGSDKRVSRSERSGRYGSAFDRDDRDDRDTRSRRRDSEYKRYRD ERSSERYDDYRDYDSPERDRMRDRERRNSDRSEDGYHSDGDYMDHDYRQDYYMDEKES KTIMLRGLPININENDIRELVESFEGPQPADVRLMKRKTGLSRGFAFVEFYHLQDATR WMEANQKKLVIQGKTIAMHYSNPRPKFEDWLCNKCGLYNFRRRLKCFRCGAAKAESDL EAPSGSSDAPQSTDYYSDSGYVSSAIILRNIGPHTVVDSILSALAPYVSLVVSNIRLI KDKQTQQNRGFAFVQLPSTLEASQLLQILQTLHPPLKIDGKTVGVDFAKSARKDLVLP DGHRVSAFSVASTAIAAAQWSSTQQAQQSGEGGEYAYLQPGQEGYANYGQCSQDYQPF YQAQTGAAEQSTAPQAEGSAPVPATTSAVVCQSPQMYQQPGSPTQSGTSTAANTTPAS TTSTTEEAAPPNAVIPGVKYSVPDTSTYQYDESSGYYYDPQTGLYYDPNSQYYYNSLT QQYLYWDGEKQTYLPAADGAGQSGAQPNGANAGSSKEGKEKKEKPKSKTAQQIAKDME RWAKSLNKQKENFKNSFQPLSARDEERKESAAADAGFALFEKKQGALLERQFMPDMMM MVNTEEEEKPPNKALVAAYSGDSDNEEESERLLGAVDEEKLLDWKKLACLLCRRQFPN KDALTRHQQLSDLHKQNLEVYRRSKMSEQELEALELKEREAKYRDRAAERREKYGIPE PPEPKRKRFDPTVVNYEQPTKDGIDNSNIGNKMLQAMGWKEGSGLGRKSQGITAPIQA QVRMRGAGLGAKGSSYGVNTSDSYKDAVRKAMFARFSEME" BASE COUNT 982 a 662 c 789 g 739 t ORIGIN 1 cggacgcgtg ggcggacgcg tgggcggacg cgtgggcaga gctacggaga ggaggtgttg 61 ctggagtaca gcccggtgac tttatcacag ccaccgcttg ctgatctaaa agtgtgagcc 121 atgggatcag ataaacgtgt gagtcgcagt gagcggagtg gaagatatgg ttcagcattt 181 gatcgagatg atcgcgatga tagagacact aggagccgtc gcagagattc tgaatacaaa 241 agatacagag atgaacgcag cagcgaacgc tacgatgact acagagatta tgacagtccc 301 gagcgtgata gaatgcgtga cagagagagg aggaacagtg atcgttcaga agatggttat 361 cattcagatg gtgactatat ggaccatgac taccggcagg actattacat ggatgaaaaa 421 gagagcaaga cgatcatgct aaggggcctc cccattaata ttaatgagaa cgacattcgt 481 gaactagtgg agtcttttga aggaccgcag cctgctgatg tgcggctgat gaagagaaag 541 acaggtttaa gccgcggttt cgccttcgtg gagttttatc acttgcaaga tgctacccgc 601 tggatggaag ccaatcagaa aaagcttgta atccagggaa agactattgc catgcattac 661 agcaatcccc gacccaaatt tgaggactgg ctatgtaaca agtgtggcct gtacaacttt 721 cggcgaagac ttaaatgctt ccgctgtggg gcagccaagg ctgaatctga tttggaagcc 781 ccttcaggat catctgatgc tcctcagtct actgattact atagtgacag tggctatgta 841 tcctcagcca taatccttcg gaatattggg ccccacactg tagtggattc catcttgtct 901 gcgcttgccc cctatgtctc acttgtggtc agcaacatcc ggcttatcaa agacaagcaa 961 acacagcaaa acagaggctt tgcatttgtg cagcttcctt ctactctgga ggcatcacaa 1021 ctcctacaaa ttctgcagac cctgcatcca cctctcaaaa ttgatgggaa aactgtaggt 1081 gtggattttg caaaaagcgc tagaaaggat cttgtgttgc cagatgggca cagagtcagt 1141 gcgttctctg tggcaagcac agctattgct gctgcacagt ggtcttcgac tcagcaggct 1201 cagcaaagtg gggaaggtgg ggaatatgcc tacctgcagc caggacagga gggctatgct 1261 aattatggac agtgctccca agattaccaa ccattttacc aagcacagac tggagcagca 1321 gagcaaagca cagcaccaca agctgagggt tctgctccag tgccagcaac tacaagtgca 1381 gttgtgtgtc aaagtcctca aatgtaccag caacccggct ctccgaccca atctggtaca 1441 agtacagctg ccaacacgac tccagcatct actactagca caacagaaga agcagcccct 1501 cctaatgctg ttattcctgg agttaaatac tctgttccag atacttccac atatcaatat 1561 gacgaaagct caggatatta ctatgatccc caaactggtc tttactatga cccgaattct 1621 cagtattact acaactctct gactcagcag tacctatatt gggatggtga aaaacagact 1681 tacttgccag cagctgatgg agcaggacaa agtggagctc agcccaatgg tgcaaatgca 1741 ggctcgtcta aggagggcaa agagaaaaaa gaaaaaccaa aaagcaagac cgctcaacag 1801 attgcaaagg atatggagcg atgggccaaa agtttaaaca aacagaagga aaatttcaag 1861 aacagcttcc agccactcag tgcccgtgat gaagagagaa aagagtccgc agcagcagat 1921 gctggatttg ctttgtttga gaaaaagcag ggagctttgt tggagaggca gtttatgcca 1981 gatatgatga tgatggttaa cactgaggag gaagaaaagc ccccaaataa agcactggta 2041 gctgcttata gtggtgatag tgacaatgag gaggagagtg agcgactact tggggcagtg 2101 gatgaggaaa agttgctgga ttggaagaag ctggcatgtc tgttatgccg cagacaattc 2161 ccaaacaagg atgccctgac aagacatcag caactgtcag acctgcataa gcaaaacctg 2221 gaagtctata ggagatcaaa gatgtctgaa caagagcttg aagctttaga attaaaagaa 2281 agagaggcaa aatacaggga ccgtgcagca gaaaggaggg aaaaatatgg cattccagag 2341 ccaccagaac ccaaacgcaa gcgatttgac cctactgtgg tgaattatga gcaacccaca 2401 aaagatggta tcgataatag caatattgga aataagatgc tgcaggccat gggttggaag 2461 gagggttcag ggctgggccg aaagagtcag ggaattacag ctcctattca ggctcaggtc 2521 agaatgaggg gggccggtct aggagccaag ggcagctcat atggagtaaa cacatcagac 2581 tcctacaagg atgcagtgag gaaagcaatg tttgcgcgct tctcagaaat ggaataatga 2641 gagacttaat acgacttgaa aaactgtagc tttttgtgaa tcaaaaatgg aaacatctgt 2701 gctgttcctc taaatggcaa aactggaaaa aaatccctgt aggactctgt tcttgagcag 2761 agggagcatg aacctgtaaa tatgtaaaat atatatattt tgtacagtgt acatattttt 2821 ttgtaaacat ttacaccatc aaaaaaagtt tttgcattag aagattcagg tcattcggtt 2881 tgtgacgcac caaacgttac ttgtagaaca ctcgagcgtt cccatcttac agatgttaca 2941 caaccatgaa atccttttta ttgcaagatc gtcattttgt cataagactg aacacaatcg 3001 cacagctgtg ctccctcaaa ggacactgcc atcttgtcat agcacagtat caggccaact 3061 ttgtatatgg aaaactttgt acattgtctg gtgtggtttt ttgtttttgt tttttatttt 3121 ggactttatt gcccaaataa atttcaaagt aaatgtcaaa aaaaaaaaaa aa //