LOCUS BC135059 923 bp mRNA linear VRT 26-JUN-2007 DEFINITION Danio rerio si:dkeyp-119b4.5, mRNA (cDNA clone IMAGE:8154800), complete cds. ACCESSION BC135059 VERSION BC135059.1 KEYWORDS . SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 923) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 923) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (20-MAR-2007) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: John Ngai, Nancy Freeman, NIDCD cDNA Library Preparation: Dr. Sumio Sugano cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 303 Row: p Column: 12 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 113676686 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..923 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" /clone="IMAGE:8154800" /tissue_type="Olfactory epithelium" /clone_lib="NIH_ZGC_14" /lab_host="DH10B" /note="Vector: pME18S-FL3" gene 1..923 /gene="si:dkeyp-119b4.5" /gene_synonym="fj65c11" /gene_synonym="MOXD1" /gene_synonym="wu:fj65c11" /db_xref="GeneID:570584" /db_xref="ZFIN:ZDB-GENE-030131-9320" CDS 110..589 /gene="si:dkeyp-119b4.5" /gene_synonym="fj65c11" /gene_synonym="MOXD1" /gene_synonym="wu:fj65c11" /codon_start=1 /product="si:dkeyp-119b4.5 protein" /protein_id="AAI35060.1" /db_xref="GeneID:570584" /db_xref="ZFIN:ZDB-GENE-030131-9320" /translation="MSENKLFCAIVFLTSLFCSTCSQGTRFVHSAALDAERRHNIKWG FDESTITFEVEVETRGYVGFGLSPTGAMSSSDIVIGGVLNGSPYLLDYFTDSNRKVHR DPLQNYELLYGRENDTHTVLAFSRNLQTCDDNDKIITVGLTRCIILWLQNSERNSFR" BASE COUNT 279 a 182 c 196 g 266 t ORIGIN 1 aaaagcaaac aaacactctt gccctcggaa gttgcatatt tccataaact gctctatgga 61 taaaaagcgt gcctgagtgc agtcggaact gtttgcgatt aagctcgata tgtctgaaaa 121 taagcttttt tgcgcaatag ttttcttaac ttcactcttc tgctcgacat gctcacaggg 181 gacacggttt gttcattcag ctgctctaga tgcggagagg agacacaaca ttaagtgggg 241 atttgacgag tccacgataa cttttgaggt agaagtggaa acgagggggt atgtgggatt 301 cggtttgtca cccaccggtg cgatgtcttc gtctgatatc gttataggcg gtgtgctcaa 361 cggaagccca tatctgctgg actactttac agattctaac agaaaggtcc atagagatcc 421 actccagaac tacgagctgc tatacggcag agagaatgac acacatacag tcctggcttt 481 cagcagaaac ctccagacct gcgatgacaa tgacaaaatc atcacggtag gtttgactag 541 atgcatcatt ctttggctcc agaactctga gagaaacagc tttcggtgac agggtttctt 601 tattcaattt tttgattgtg taccaaacca aagaattatc tattttttta acttgtctct 661 cagatttaat tacaatttca gcacacagca gttcatccag ggggaaacaa ttgtacatac 721 agttttattg acaggataaa gtgaccatga aatcaaaata ggggttatgt gcagcaaagt 781 tctgtactcg gtaaaacctt atgcttgtgt taataattta aagggactgt tcattcagac 841 atgctcttta gcttttataa attcactgta aaccatggct acatgtagct ttatgcacgt 901 gagcattaaa aaaaaaaaaa aaa //