LOCUS BC125092 2414 bp mRNA linear HUM 04-OCT-2006 DEFINITION Homo sapiens cartilage oligomeric matrix protein, mRNA (cDNA clone MGC:149768 IMAGE:40118200), complete cds. ACCESSION BC125092 VERSION BC125092.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2414) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2414) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-OCT-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 27 Row: l Column: 9. FEATURES Location/Qualifiers source 1..2414 /db_xref="H-InvDB:HIT000388545" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:149768 IMAGE:40118200" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_282" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: CCTTTAAT sequenced from the reverse primer" gene 1..2414 /gene="COMP" /gene_synonym="MED" /gene_synonym="THBS5" /db_xref="GeneID:1311" /db_xref="HGNC:HGNC:2227" /db_xref="MIM:600310" CDS 30..2303 /gene="COMP" /gene_synonym="MED" /gene_synonym="THBS5" /codon_start=1 /product="cartilage oligomeric matrix protein" /protein_id="AAI25093.1" /db_xref="GeneID:1311" /db_xref="HGNC:HGNC:2227" /db_xref="MIM:600310" /translation="MVPDTACVLLLTLAALGASGQGQSPLGSDLGPQMLRELQETNAA LQDVRELLRQQVREITFLKNTVMECDACGMQQSVRTGLPSVRPLLHCAPGFCFPGVAC IQTESGARCGPCPAGFTGNGSHCTDVNECNAHPCFPRVRCINTSPGFRCEACPPGYSG PTHQGVGLAFAKANKQVCTDINECETGQHNCVPNSVCINTRGSFQCGPCQPGFVGDQA SGCQRRAQRFCPDGSPSECHEHADCVLERDGSRSCVCAVGWAGNGILCGRDTDLDGFP DEKLRCPERQCRKDNCVTVPNSGQEDVDRDGIGDACDPDADGDGVPNEKDNCPLVRNP DQRNTDEDKWGDACDNCRSQKNDDQKDTDQDGRGDACDDDIDGDRIRNQADNCPRVPN SDQKDSDGDGIGDACDNCPQKSNPDQADVDHDFVGDACDSDQDQDGDGHQDSRDNCPT VPNSAQEDSDHDGQGDACDDDDDNDGVPDSRDNCRLVPNPGQEDADRDGVGDVCQDDF DADKVVDKIDVCPENAEVTLTDFRAFQTVVLDPEGDAQIDPNWVVLNQGREIVQTMNS DPGLAVGYTAFNGVDFEGTFHVNTVTDDDYAGFIFGYQDSSSFYVVMWKQMEQTYWQA NPFRAVAEPGIQLKAVKSSTGPGEQLRNALWHTGDTESQVRLLWKDPRNVGWKDKKSY RWFLQHRPQVGYIRVRFYEGPELVADSNVVLDTTMRGGRLGVFCFSQENIIWANLRYR CNDTIPEDYETHQLRQA" BASE COUNT 493 a 758 c 799 g 364 t ORIGIN 1 gagcagccac ccagctcccc gccaccgcca tggtccccga caccgcctgc gttcttctgc 61 tcaccctggc tgccctcggc gcgtccggac agggccagag cccgttgggc tcagacctgg 121 gcccgcagat gcttcgggaa ctgcaggaaa ccaacgcggc gctgcaggac gtgcgggagc 181 tgctgcggca gcaggtcagg gagatcacgt tcctgaaaaa cacggtgatg gagtgtgacg 241 cgtgcgggat gcagcagtca gtacgcaccg gcctacccag cgtgcggccc ctgctccact 301 gcgcgcccgg cttctgcttc cccggcgtgg cctgcatcca gacggagagc ggcgcgcgct 361 gcggcccctg ccccgcgggc ttcacgggca acggctcgca ctgcaccgac gtcaacgagt 421 gcaacgccca cccctgcttc ccccgagtcc gctgtatcaa caccagcccg gggttccgct 481 gcgaggcttg cccgccgggg tacagcggcc ccacccacca gggcgtgggg ctggctttcg 541 ccaaggccaa caagcaggtt tgcacggaca tcaacgagtg tgagaccggg caacataact 601 gcgtccccaa ctccgtgtgc atcaacaccc ggggctcctt ccagtgcggc ccgtgccagc 661 ccggcttcgt gggcgaccag gcgtccggct gccagcggcg cgcacagcgc ttctgccccg 721 acggctcgcc cagcgagtgc cacgagcatg cagactgcgt cctagagcgc gatggctcgc 781 ggtcgtgcgt gtgtgccgtt ggctgggccg gcaacgggat cctctgtggt cgcgacactg 841 acctagacgg cttcccggac gagaagctgc gctgcccgga gcgccagtgc cgtaaggaca 901 actgcgtgac tgtgcccaac tcagggcagg aggatgtgga ccgcgatggc atcggagacg 961 cctgcgatcc ggatgccgac ggggacgggg tccccaatga aaaggacaac tgcccgctgg 1021 tgcggaaccc agaccagcgc aacacggacg aggacaagtg gggcgatgcg tgcgacaact 1081 gccggtccca gaagaacgac gaccaaaagg acacagacca ggacggccgg ggcgatgcgt 1141 gcgacgacga catcgacggc gaccggatcc gcaaccaggc cgacaactgc cctagggtac 1201 ccaactcaga ccagaaggac agtgatggcg atggtatagg ggatgcctgt gacaactgtc 1261 cccagaagag caacccggat caggcggatg tggaccacga ctttgtggga gatgcttgtg 1321 acagcgatca agaccaggat ggagacggac atcaggactc tcgggacaac tgtcccacgg 1381 tgcctaacag tgcccaggag gactcagacc acgatggcca gggtgatgcc tgcgacgacg 1441 acgacgacaa tgacggagtc cctgacagtc gggacaactg ccgcctggtg cctaaccccg 1501 gccaggagga cgcggacagg gacggcgtgg gcgacgtgtg ccaggacgac tttgatgcag 1561 acaaggtggt agacaagatc gacgtgtgtc cggagaacgc tgaagtcacg ctcaccgact 1621 tcagggcctt ccagacagtc gtgctggacc cggagggtga cgcgcagatt gaccccaact 1681 gggtggtgct caaccaggga agggagatcg tgcagacaat gaacagcgac ccaggcctgg 1741 ctgtgggtta cactgccttc aatggcgtgg acttcgaggg cacgttccat gtgaacacgg 1801 tcacggatga cgactatgcg ggcttcatct ttggctacca ggacagctcc agcttctacg 1861 tggtcatgtg gaagcagatg gagcaaacgt attggcaggc gaaccccttc cgtgctgtgg 1921 ccgagcctgg catccaactc aaggctgtga agtcttccac aggccccggg gaacagctgc 1981 ggaacgctct gtggcataca ggagacacag agtcccaggt gcggctgctg tggaaggacc 2041 cgcgaaacgt gggttggaag gacaagaagt cctatcgttg gttcctgcag caccggcccc 2101 aagtgggcta catcagggtg cgattctatg agggccctga gctggtggcc gacagcaacg 2161 tggtcttgga cacaaccatg cggggtggcc gcctgggggt cttctgcttc tcccaggaga 2221 acatcatctg ggccaacctg cgttaccgct gcaatgacac catcccagag gactatgaga 2281 cccatcagct gcggcaagcc tagggaccag ggtgaggacc cgccggatga cagccaccct 2341 caccgcggct ggatgggggc tctgcaccca gccccaaggg gtggccgtcc tgagggggaa 2401 gtgagaaggg ctca //