LOCUS BC115434 2379 bp mRNA linear ROD 04-SEP-2007 DEFINITION Mus musculus pentatricopeptide repeat domain 3, mRNA (cDNA clone MGC:143869 IMAGE:40094203), complete cds. ACCESSION BC115434 VERSION BC115434.2 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2379) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2379) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (13-APR-2006) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC115434.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 23 Row: c Column: 24. FEATURES Location/Qualifiers source 1..2379 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /clone="MGC:143869 IMAGE:40094203" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_284" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: GTTTCCAT sequenced from the reverse primer" gene 1..2379 /gene="Ptcd3" /db_xref="GeneID:69956" /db_xref="MGI:MGI:1917206" CDS 19..2076 /gene="Ptcd3" /codon_start=1 /product="pentatricopeptide repeat domain 3" /protein_id="AAI15435.1" /db_xref="GeneID:69956" /db_xref="MGI:MGI:1917206" /translation="MAAAAVAARRLSFRSGLVLLQTTRGTGVCEPKVCCRFYAGTESL PKVEGSDITGIEEIVIPKKKTWDKVAVLQALASTVNRDPTAAPYVFHDDPYLIPTSAL ESRSFLLAKKSGETAAKFIINSYPKYFQKDIAEPHIPCLMPEYFEPQIEDVSEAALEE RIRLRKVRASVDMFDQLLQAGTTVSLETTNSLLDLLCYYGDQEPPADYPFQQTEHLEN LEEAAEENNQTSKMESGPWKAQNNAERIFALMPEKNARSYCTMIRGMVKHRAYAQALN VYAELLNNRLSADVYTFNALIEAKTFILNEKFEEKWNDILDLLKHMVAQKVKPNLQTF NTILKGLRKCYSLGRIPALQILREMKHIGIEPSLATYHHIIHLFYPRDLSAIKMPSLI IYDIMNELEGRTFSPQDLDDGRFFQLAMSVCSSLRDLELAYQVHRLLNTGDNRKLVGH DPLRKVYYSKFFSLICSLEQIDVTLKWYKDLIPSVFLPHYQIFIGLLQALDVANRLEL VPQIWKDSKEYSHTFRDALREEVLMLMARDKHPPELQVAFADCAADIKSTYEDQGARQ PAFDWPANPLQYIAVLFLRGGRTQEAWKMLELFKKHNKIPRNELLEEFMDTAKASGST ALAIEVVKLASAFSLPIGESLAQRVVMDFTVDPEQKEALGNLTELNSSDGESSSDSDS DDK" BASE COUNT 725 a 505 c 534 g 615 t ORIGIN 1 tccgcgaaga gtccaaagat ggcggcggcg gcggttgcag ctcgacgcct gtcctttcgc 61 agcgggcttg tcttgctgca gaccactcgg gggacgggtg tgtgtgaacc gaaggtctgt 121 tgcagatttt atgctggaac tgaatccctc ccaaaggttg aaggatcaga tataacaggg 181 attgaagaaa tagtcattcc aaaaaagaaa acatgggata aagtggctgt tcttcaggca 241 cttgcatcca cagtaaacag ggatcctaca gctgcacctt atgtatttca cgatgatcct 301 tacctcatac caacctctgc tctggagtct cgttcatttt tattggcaaa gaagtctgga 361 gagactgcag caaagtttat tattaattca tatcccaaat atttccaaaa ggatatagct 421 gagcctcata taccgtgctt aatgcctgag tactttgagc ctcagattga agatgtaagc 481 gaagctgccc tggaggagcg aatcagactc agaaaagtca gagcttctgt ggacatgttt 541 gaccagctct tgcaagcagg aaccacagtc tctcttgaaa caactaatag tcttttggat 601 ttattgtgtt actatggtga ccaagagccc ccagctgact atccttttca acaaactgaa 661 catttggaaa acttggaaga agctgcagag gaaaataatc aaacatccaa gatggagtct 721 ggtccttgga aagcacaaaa caatgctgag aggatcttcg ctttaatgcc agagaagaat 781 gcacgctcct actgcacgat gatccgaggg atggtgaagc accgagctta tgcacaggca 841 ctgaacgtgt acgcagagtt attaaataac agactcagtg ctgatgtata tacctttaat 901 gcattgattg aagcaaaaac attcatactc aatgagaaat ttgaggaaaa atggaatgat 961 atactggatc tactgaaaca tatggttgca cagaaagtga aaccaaatct gcagactttt 1021 aatacaatat tgaaaggtct ccggaagtgt tactcacttg gaaggatacc agccttacag 1081 atactacgtg aaatgaaaca tattggaata gaaccctcac ttgcaacata ccatcatatt 1141 attcacctct tttatccaag agacttaagc gctataaaaa tgccatccct catcatctat 1201 gatatcatga atgaattaga gggaagaaca ttttctccac aggaccttga tgatggtaga 1261 ttttttcagt tggccatgag tgtgtgttca tctctcagag atttagagct tgcttaccaa 1321 gtacacagac ttttaaacac gggggacaac cggaaactgg tcggacatga tcctctacgt 1381 aaggtatatt attcgaagtt tttcagtttg atttgttcac tggaacaaat tgatgtcacc 1441 ttgaagtggt ataaggacct aataccttca gtgttccttc cccactacca aatattcata 1501 ggtcttcttc aagcattgga tgtggccaat agactagaat tggttcctca gatttggaaa 1561 gatagtaaag aatacagtca tactttccga gatgccctaa gagaagaagt attgatgctc 1621 atggccaggg ataaacatcc accagagctt caggttgcat ttgctgactg tgctgctgat 1681 atcaaatcca catacgaaga ccagggtgcc cggcagcctg cttttgattg gccagccaac 1741 cctttacagt atatagctgt ccttttttta agaggtggcc gaacccagga agcctggaaa 1801 atgttggaac tcttcaaaaa gcataataag attcccagaa atgaattgct ggaggaattc 1861 atggacacag cgaaagcatc cggtagcact gctctggcca ttgaggttgt aaagctggca 1921 agtgccttca gcttgcctat tggggagagc cttgcccaaa gagtagtgat ggatttcaca 1981 gttgacccag aacaaaaaga agccctgggt aacctcactg aactgaacag tagcgatgga 2041 gaaagcagca gtgacagtga cagtgacgac aaatgaaaga gagaggtggc tcacaatagc 2101 tgctggaatg ttagaagtgg taaaaataaa cagatacagg gctgggatcc aatataagct 2161 ctgtattgta ttgtactggc ctaaacctaa gaccctgggg ttcatctgca gtaccgctaa 2221 gatgcacatc tggccagttt ttttgccaag acagcaacaa gcattgtgaa gtctgacttt 2281 tggagaagaa caaattccac ataaacacac tgtttgcagg cctcattcct actacgccca 2341 tcatgttaga acccacaggc ccttgctgcc tacctgctc //