LOCUS BC107903 1955 bp mRNA linear ROD 18-MAR-2009 DEFINITION Rattus norvegicus adaptor-related protein complex 1, mu 1 subunit, mRNA (cDNA clone MGC:125095 IMAGE:7455976), complete cds. ACCESSION BC107903 VERSION BC107903.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1955) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1955) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Howard Jacobs cDNA Library Preparation: Express Genomics cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 244 Row: l Column: 1 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 112984343. FEATURES Location/Qualifiers source 1..1955 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:125095 IMAGE:7455976" /tissue_type="Testis, rat (Brown Norway)" /clone_lib="NIH_MGC_238" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..1955 /gene="Ap1m1" /db_xref="GeneID:306332" /db_xref="RGD:1307653" CDS 72..1343 /gene="Ap1m1" /codon_start=1 /product="adaptor-related protein complex 1, mu 1 subunit" /protein_id="AAI07904.1" /db_xref="GeneID:306332" /db_xref="RGD:1307653" /translation="MSASAVYVLDLKGKVLICRNYRGDVDMSEVEHFMPILMEKEEEG MLSPILAHGGVRFMWIKHNNLYLVATSKKNACVSLVFSFLYKVVQVFSEYFKELEEES IRDNFVIIYELLDELMDFGYPQTTDSKILQEYITQEGHKLETGAPRPPATVTNAVSWR SEGIKYRKNEVFLDVIEAVNLLVSANGNVLRSEIVGSIKMRVFLSGMPELRLGLNDKV LFDNTGRGKSKSVELEDVKFHQCVRLSRFENDRTISFIPPDGEFELMSYRLNTHVKPL IWIESVIEKHSHSRIEYMVKAKSQFKRRSTANNVEIHIPVPNDADSPKFKTTVGSVKW VPENSEIVWSIKSFPGGKEYLMRAHFGLPSVEAEDKEGKPPISVKFEIPYFTTSGIQV RYLKIIEKSGYQALPWVRYITQNGDYQLRTQ" BASE COUNT 448 a 584 c 509 g 414 t ORIGIN 1 ccaagatgaa cgccggcagt tcctgccgtt gccgccgccc tcggctactg ccgaggcctt 61 ccaaagccgc catgtccgcc agcgccgtct acgtactgga cctgaagggc aaggtgctca 121 tctgcaggaa ctaccgtggg gatgtggaca tgtcagaggt ggagcacttc atgcccattc 181 tgatggagaa ggaggaggag ggcatgctgt cacctatctt ggcccatggt ggcgttcgtt 241 tcatgtggat taagcacaac aacctgtacc tggtcgccac ttcaaaaaag aatgcttgtg 301 tgtcgctagt attctccttc ctctacaagg tggtgcaggt gttctctgag tactttaagg 361 agctggagga ggagagcatc cgagacaact ttgttatcat ttatgagctt ctggatgagc 421 tcatggactt cggctacccg cagaccaccg acagcaagat cctgcaggag tacatcactc 481 aggaaggcca caagctggaa acaggagccc ctcggccccc agccaccgtc accaatgctg 541 tgtcctggcg ctcagaaggt atcaagtatc ggaagaacga agtattcctg gacgtcattg 601 aggccgttaa cctcttggtc agtgccaatg gcaacgtgct gcgtagtgag atcgtgggtt 661 ccatcaagat gcgcgtcttc ctctcaggca tgcctgagct acgcctgggt ctcaatgaca 721 aagtcctctt cgacaacacg ggccgaggga agagcaagtc agtggagctg gaggacgtga 781 agttccacca gtgtgtgcgg ttgtcacgtt ttgagaatga ccgcacaata tccttcattc 841 caccagacgg agaattcgaa ctcatgtcct accgcctcaa cacccatgtg aagcctttga 901 tctggatcga gtccgtgatt gaaaagcatt cccacagccg cattgagtac atggtcaagg 961 ccaagagcca gttcaagcgg cggtcaacag ccaacaatgt ggagatccac atcccagtcc 1021 ccaatgacgc cgactcaccc aagttcaaga ccacggtggg gagtgtcaag tgggtccctg 1081 aaaacagtga gatcgtgtgg tccatcaaat ccttcccggg tggcaaggag tacctgatgc 1141 gggcccactt cggccttccc agtgtggaag cggaagacaa ggagggcaag cctcccatca 1201 gcgtcaagtt cgagatcccc tatttcacta cctctggcat ccaggtgcgc tacctgaaaa 1261 tcattgagaa gagcgggtac caggccctgc cctgggtacg ctatatcacg cagaatggag 1321 attaccagct ccggacccag tgagaggcct tggtaaccag cccagcccac ccagcctcag 1381 ggcacacctg ccacactcac caaaactgaa gctggagggt ggccctggac gtgcagccac 1441 cctcccctca agcctgagta gactcacaca gaaccccttc cctggtccca ttctgatcca 1501 gggtgggaag gaagggtctg ccagcctccc ccagggacaa gccagctgga gctgagctcc 1561 tggtgcctca tgactggcca cccaccaccc tgtgggcgcc atccctgctc accactggag 1621 cctccttttg ttgccatttt gctgagcatg ttggtcactg tcgtctgtgg ctgtcctgtc 1681 acctttctgt cctgtcctgt gcagctgcct cctatccaca ctggtccttc cctggcagga 1741 cagtcgctct cctgggccag ctgtgccccc ttgcccgccc ttgaccacat cagtgttttc 1801 cccggaaggg cacatggcct cagcctctgc cccaaagtcc ctgggcagca caggccagtc 1861 tcactgtaca agacctcgtc gtcctccacc catgtgtgac agtgacatta aagtctattt 1921 gttacatgtg caaaaaaaaa aaaaaaaaaa aaaaa //