LOCUS BC107465 1555 bp mRNA linear ROD 17-JUL-2006 DEFINITION Rattus norvegicus profilin family, member 4, mRNA (cDNA clone MGC:124913 IMAGE:7453892), complete cds. ACCESSION BC107465 VERSION BC107465.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1555) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1555) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Howard Jacobs cDNA Library Preparation: Express Genomics cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 244 Row: l Column: 24 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 57222327. FEATURES Location/Qualifiers source 1..1555 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:124913 IMAGE:7453892" /tissue_type="Testis, rat (Brown Norway)" /clone_lib="NIH_MGC_238" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..1555 /gene="Pfn4" /db_xref="GeneID:494222" /db_xref="RGD:1359707" CDS 1017..1406 /gene="Pfn4" /codon_start=1 /product="profilin family, member 4" /protein_id="AAI07466.1" /db_xref="GeneID:494222" /db_xref="RGD:1359707" /translation="MSHLQNLLLDTLLGTKHVDGAALIKLQEKTLCVTSPGFSVMPCD VRTLLNGFAKNPLLTRREGLYFREKDYKCVRADDCSLYAKKENTGVVVVKTHMYLLVA TYTAGMYPSVCVEATEKLGEYLRKKGN" BASE COUNT 435 a 318 c 359 g 443 t ORIGIN 1 cgcgtgcaca cctcgtagaa cagcacggag gagggcggcc ctcaagccct ggccggccgc 61 agatcgagaa agaggctgtg tacctgtctc gcgctaacag gcagctgtca cagccaatca 121 gctttccaga tcggtgcttc gcctgcccct ggcggagcct cgccttctct gtagccctgg 181 tacccggtgt ttagttcccg gcctccccga ctttagattc agttaggcta ccggcctccc 241 atcaatcagt tctcagaagg gagcggcagg agagtcgttc gccttactag gtacctgcgg 301 tgaacgagtg tttgtggcag ttgaccctat gagggccgtc caagatggca gcccatgagc 361 aggaaatgta gctccaaaga gcttccaagg cggtcttaga gctcaggttt gctgaccagt 421 gtcttgtcta cagcgttgat gctggccaag gaggaggaat gaaaaaatta ccttttttaa 481 gtcattggtg caccttaagt ggttttgaaa ttttgtggat aactggttgc ttttttttgt 541 ttttacttta ttttactttt atttatttgt ttgttcattt ttgcggggct gagaactgag 601 tggaggattt tacataccca gctctaccgc caaaaattat tctcagatct ttattttttt 661 taagacaggg tctctctggc cttgaacttg tgaccttcct gtccttagag tacccaaagt 721 aataggcatg gactttttgt ttttaaatct cagataaatc attattaaat agctaaaaat 781 attgaggctc tgattttttt tttcaaactc tataagccac tctgtgaatt ctgatttttc 841 tataatagtt tttctttccc tctgagtatt ggtgaacact ggatgatgga ccaccatttt 901 cactcgtcca acattttaaa ggacacacac tgaaaataaa actgaagcgt cagaagcact 961 tgaattctca ctcgtggact cttcaactac tgtttcctgt tcagagctga ggaagcatga 1021 gtcacttgca aaacttactg ttagataccc tactggggac gaagcatgtg gacggtgcag 1081 ccctcatcaa actccaagaa aagaccctgt gtgtgacatc accaggattt agtgtaatgc 1141 catgtgatgt tcgaacactt ttgaatggat ttgccaaaaa cccattatta acccgaaggg 1201 aagggttgta tttcagggaa aaggattaca aatgtgtccg ggcagatgac tgttctctct 1261 atgctaagaa ggagaacact ggtgtggtgg tggtgaagac ccacatgtat cttctggtgg 1321 caacctacac tgcaggcatg tatcctagtg tctgcgtgga agccacagag aagctgggag 1381 agtatctaag aaaaaaagga aactaagaca tcagataact agtgaagacg acttcgttgt 1441 tttagaaaaa aatgtataga tccttaagaa aaatattttg tggttgaaaa tagtgtggaa 1501 gattaaaaca aagactgagt taagggaaaa aaaaaaaaaa aaaaaaaaaa aaaaa //