LOCUS BC107002 1225 bp mRNA linear ROD 02-DEC-2006 DEFINITION Mus musculus ephrin A3, mRNA (cDNA clone MGC:129301 IMAGE:40045387), complete cds. ACCESSION BC107002 VERSION BC107002.2 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1225) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1225) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Oct 4, 2006 this sequence version replaced BC107002.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Baylor Human Genome Sequencing Center cDNA Library Preparation: Baylor Human Genome Sequencing Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAM Plate: 11 Row: j Column: 2. FEATURES Location/Qualifiers source 1..1225 /organism="Mus musculus" /mol_type="mRNA" /db_xref="taxon:10090" /clone="MGC:129301 IMAGE:40045387" /tissue_type="PCR rescued clones" /clone_lib="NIH_MGC_284" /note="Vector: pCR-Blunt II-TOPO; Clone identification sequence tag: CACTAACA sequenced from the forward primer" gene 1..1225 /gene="Efna3" /gene_synonym="EFL-2" /gene_synonym="Ehk1-L" /gene_synonym="LERK-3" /db_xref="GeneID:13638" /db_xref="MGI:MGI:106644" CDS 47..739 /gene="Efna3" /gene_synonym="EFL-2" /gene_synonym="Ehk1-L" /gene_synonym="LERK-3" /codon_start=1 /product="ephrin A3" /protein_id="AAI07003.1" /db_xref="GeneID:13638" /db_xref="MGI:MGI:106644" /translation="MAAAPLLLLLLLVPVPLLPLLAQGPGGALGNRHAVYWNSSNQHL RREGYTVQVNVNDYLDIYCPHYNSSGPGGGAEQYVLYMVNLSGYRTCNASQGSKRWEC NRQHASHSPIKFSEKFQRYSAFSLGYEFHAGQEYYYISTPTHNLHWKCLRMKVFVCCA STSHSGEKPVPTLPQFTMGPNVKINVLEDFEGENPQVPKLEKSISGTSPKREHLPLAV GIAFFLMTLLAS" BASE COUNT 233 a 385 c 371 g 236 t ORIGIN 1 gagtgcgggg ctcagtcggg gggcggcggc ggcggcggct ccggggatgg cggcggctcc 61 gctgctgctg ctgctgctgc tcgtgcccgt gccgctgctg ccgctgctgg cccaggggcc 121 tgggggcgca ctgggaaacc ggcatgcggt atactggaac agctccaatc agcacctgcg 181 gcgagagggc tacaccgtgc aggtgaacgt gaacgactat ctggatattt actgtccgca 241 ctacaacagc tcagggcctg gcggcggggc ggagcagtac gtgctgtaca tggtgaacct 301 gagcggctac cgcacctgca acgccagcca aggctccaag cgctgggaat gcaaccggca 361 gcacgcctcg cacagcccca tcaagttctc cgagaagttc cagcgttaca gcgccttctc 421 gctgggctat gaattccatg ccggccaaga atactactac atctccacgc ccactcacaa 481 cctgcactgg aagtgtctga ggatgaaggt gttcgtctgc tgcgcctcca catcgcactc 541 cggggagaag ccggtcccca ctctccccca gttcaccatg ggccccaatg tgaagatcaa 601 cgtgttggaa gactttgagg gagagaatcc ccaggtgccc aagcttgaga agagcatcag 661 tgggaccagc cccaagcggg aacacctgcc tctggccgtg ggcatcgcct tcttcctcat 721 gacgctcttg gcctcctagc tctgcccctt cctatgacag agagaggtgg gaagggctga 781 gaaggagcag ggagcttgct gtggggccta catccttctt cccatggttg ggagcggggt 841 ctgcactgta catctctctg ggcctgccct ctttgcccac acactctcta ggacaggcac 901 cgtagtggat caggcacagg gacagccaca ggtcccaggt ggcctgtggc tttggtaatg 961 tttggtacca aacctggggg ctataaaggc agtgctcagg actccctggc ccctggtacc 1021 tttccctgac ccttggtgcc ctccctcttt gtcccccaag aggcaaatat gccccagaga 1081 gaacaaacga agcatgggag gtgccccctg tcctctcctc tggggcagaa catggggagg 1141 ggactaggtg ggtgaggggt ggagcctcag gctgcccctc cccctgttta cagcaataag 1201 catgtcctct ccctccactc ccaca //