LOCUS BC091388 2515 bp mRNA linear ROD 18-MAR-2009 DEFINITION Rattus norvegicus chaperone, ABC1 activity of bc1 complex homolog (S. pombe), mRNA (cDNA clone MGC:109473 IMAGE:7321446), complete cds. ACCESSION BC091388 VERSION BC091388.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2515) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2515) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-MAR-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical College of Wisconsin cDNA Library Preparation: Open Biosystems cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 215 Row: a Column: 7 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 61557217. FEATURES Location/Qualifiers source 1..2515 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:109473 IMAGE:7321446" /tissue_type="Liver, rat" /clone_lib="NIH_MGC_247" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..2515 /gene="Cabc1" /db_xref="GeneID:360887" /db_xref="RGD:1308245" CDS 37..1986 /gene="Cabc1" /codon_start=1 /product="chaperone, ABC1 activity of bc1 complex homolog (S. pombe)" /protein_id="AAH91388.1" /db_xref="GeneID:360887" /db_xref="RGD:1308245" /translation="MAAMLGDAIMVAKGLAKLTQAAVETHLQNLGLGGELILAARALQ STAVEQISMVFGKVQGQDKHEDSYATENFEDLEAEVQFSTPQAAGSSPDFSTASSLDQ PLSSSLGHAHREGPAPAYVSSGPFREAGLSGQATSPLGRVNGRLFVDCRDLFLANSIQ RRFFHQDQAPVGGLTAEDIEKARQAKARPESKPHKQMLSERARERKVPVTRIGRLANF GGLAVGLGFGALAEVAKKSLRSENSTGKKAVLDSSPFLSEANAERIVSTLCKVRGAAL KLGQMLSIQDDAFINPHLAKIFERVRQSADFMPLKQMTKTLNNDLGPHWRDKLEYFEE RPFAAASIGQVHLARLKGGREVAMKIQYPGVAQSINSDVNNLMAVLNMSNMLPEGLFP EHLIDVLRRELTLECDYQREAAYAKKFRELLKDHPFFYVPEIVDELCSPHVLTTELIT GFPLDQAEGLSQEVRNEICYNILVLCLRELFEFHVMQTDPNWSNFFYDPQQHKVALLD FGATREYDRSFTDLYIQVIRAAADQDREAVLKKSIEMKFLTGYEVKAMEDAHLDAILI LGEAFASEEPFDFGTQSTTEKIHNLIPIMLKHRLIPPPEETYSLHRKMGGSFLICSKL KACFPCKAMFEEAYSNYCRMKSGLQ" BASE COUNT 580 a 664 c 728 g 543 t ORIGIN 1 ctcagcgtgt ggactgaata tatacagccc tgaaggatgg ctgctatgtt gggggatgcc 61 atcatggtgg ccaaaggcct tgccaagctg acccaggcag ctgtggaaac tcacctgcag 121 aacctgggcc ttggtgggga gctcatcctg gcagccaggg ccctgcagtc tacagctgtg 181 gagcagatca gcatggtctt tggaaaggtg cagggtcagg ataagcatga agattcatat 241 gccactgaga acttcgaaga tctggaagcc gaagttcagt tctcaacacc acaggcagct 301 ggaagctccc cagatttctc cacagcctcc tccctggacc agccactgtc ttcatccctg 361 ggtcatgccc acagggaggg cccagctcct gcctatgttt ccagtggacc tttcagggaa 421 gcagggctct ctggccaggc tacctctcct ctgggcagag tcaatggaag gctctttgta 481 gattgtagag acttgttctt ggccaacagc atccagcgaa gattcttcca ccaggaccag 541 gcccctgtgg gaggcctcac cgctgaagac attgaaaagg cccgtcaggc caaggctcgc 601 ccagagagca agccacacaa gcagatgctc agtgagcggg ctcgggagcg gaaggtgcca 661 gttacccgga ttgggcggtt ggccaacttt ggagggctgg ctgtaggtct gggctttggg 721 gctttggctg aggttgccaa gaagagtctg cgttctgaga actccacagg gaagaaagct 781 gtgctggatt ctagcccctt cctgtcagag gcgaatgcag agcgcattgt gagtacattg 841 tgcaaggtgc gtggggccgc actgaagctg ggccagatgc tgagcatcca ggatgatgcc 901 ttcatcaacc ctcacctggc caagatcttt gagcgggtga ggcagagcgc tgacttcatg 961 ccactgaaac agatgacgaa aactctcaac aatgacctgg gcccccattg gagggacaag 1021 ctggagtact ttgaagagcg gccctttgcg gctgcctcca tagggcaggt gcacctggcc 1081 cgtttgaagg gtggccgtga ggtggccatg aagattcagt accctggtgt ggcccagagc 1141 attaacagtg acgtcaacaa cctcatggct gtgctgaaca tgagtaacat gcttccagaa 1201 ggcctgttcc cagagcacct gattgatgtg ctgaggcggg agcttaccct tgagtgtgac 1261 taccagcggg aggctgccta tgccaagaag ttcagggagc tgctgaagga ccaccccttc 1321 ttctatgtgc ctgagattgt ggacgagctg tgcagccccc atgtgctgac cacagagctg 1381 ataacaggct tccccctgga ccaggcagaa gggctgagcc aggaagtgcg gaatgagatc 1441 tgctacaaca ttttggtgct gtgcctgagg gagctgtttg agttccatgt catgcagact 1501 gaccccaact ggtccaattt cttttatgac cctcagcagc acaaggtggc tctcctggac 1561 tttggggcaa ctcgagaata tgaccgatcc tttactgacc tctacattca ggtcatccgg 1621 gctgctgctg accaggacag ggaggcagtg ctgaagaagt ccatagagat gaagttcctc 1681 actggttatg aggtcaaggc catggaggat gcccacctgg atgccattct catcctgggg 1741 gaggcctttg cttcggaaga gccctttgac ttcggcacgc agagcaccac tgagaagatc 1801 cataacctga tccccatcat gctgaagcac cgcctcatcc cgcctcctga ggagacctac 1861 tctctgcacc gcaagatggg gggctctttc ctcatctgtt ccaagctgaa ggcctgcttc 1921 ccctgcaagg ccatgtttga ggaagcgtac agtaactact gcaggatgaa gtctgggctg 1981 cagtaggtga ggcttgggcc gggctaactg gggtcgtgcc ctccttcagg ctcagccaag 2041 cagaggcagg atgtgggcag ggacagggac ccacagcctc catgactggg aagagagcac 2101 tgcagactct gctgctgctg ctgctgtcca gtgcagacaa aaaggcagct gctttgccat 2161 ctcctcctgc tgtggatgta caacaggagc atgggacaaa gcagtgctca gctcagctca 2221 gccacctttg gggtctagtt ggccatgcag agtgaattgt gtgtttctgg gtgagcttat 2281 gtccctgccc tttgccaccc gagctcagtc tcagcatgga caacagaccc tgttaaaagc 2341 agggccgaca actggatgag cagcaggcct ctagcatgtc ccaggaaagg tagttactac 2401 cccaccccag gggatcagca taggctcttt gtttgtatgt cttgtaatta cacgttcata 2461 cctttgcatt caataaagaa gtgtgctggg aaaaaaaaaa aaaaaaaaaa aaaaa //