LOCUS BC090635 1261 bp mRNA linear ROD 30-APR-2007 DEFINITION Mus musculus ventral anterior homeobox containing gene 2, mRNA (cDNA clone MGC:116595 IMAGE:30942578), complete cds. ACCESSION BC090635 VERSION BC090635.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1261) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1261) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-FEB-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: NDAM Plate: 1208 Row: c Column: 3. FEATURES Location/Qualifiers source 1..1261 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:116595 IMAGE:30942578" /tissue_type="Eye" /clone_lib="NIH_BMAP_HA0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..1261 /gene="Vax2" /db_xref="GeneID:24113" /db_xref="MGI:MGI:1346018" CDS 31..909 /gene="Vax2" /codon_start=1 /product="ventral anterior homeobox containing gene 2" /protein_id="AAH90635.1" /db_xref="GeneID:24113" /db_xref="MGI:MGI:1346018" /translation="MGDGGAERDRGPKRREEPGGRSGRHGEHRGAEDLRADTGSASPR EIAGTSASSPAGSRESGGDSDGQQALGETDHCRRILVRDAKGTIREIVLPKGLDLDRP KRTRTSFTAEQLYRLEMEFQRCQYVVGRERTELARQLNLSETQVKVWFQNRRTKQKKD QSRDLEKRASSSASEAFATSNVLRLLEQGRLLSVPRAPSLLALTPGLPGLPASHRGTS LVDPRNSSPRLNPMPSASASSPLPPPLPAICFSSAPLLDLPAGYKLGSSAFEPYSRLE QQKVGSPGQSDKKADI" BASE COUNT 267 a 386 c 378 g 230 t ORIGIN 1 gctgtggccc aagcagcagt ggcggcgggc atgggcgatg ggggcgcgga gcgggaccgc 61 ggccccaagc gccgggagga gcctggtggc cgcagcgggc gtcacggaga gcaccgcgga 121 gcggaagatt tgcgtgctga cacaggtagc gcgagtccga gggagattgc tgggacctcc 181 gcctccagcc ctgcgggctc cagggagagc ggaggggaca gcgacggaca gcaggcgctc 241 ggtgagacag accactgccg ccgcatcctg gtacgagatg ctaaggggac cattcgggaa 301 attgtcttgc ccaagggcct ggacctcgac cgacccaagc ggacccgtac ttccttcaca 361 gcagagcagc tgtatcgtct ggagatggag ttccagcgct gccagtatgt ggtgggccga 421 gagcgcactg agttggcccg acagctgaac ctctctgaga ctcaggtgaa ggtctggttc 481 cagaaccgcc gaaccaagca gaagaaggac cagagcagag acctggagaa gcgggcatcc 541 tcctctgctt ccgaggcctt tgccacctcc aacgtcctgc ggcttctgga acagggccgg 601 ctgctctccg tgcccagggc ccccagcctc ctagcactga cccctggcct gccaggcctt 661 cccgccagcc acaggggcac ctccttggtt gaccccagaa actcctcccc acgcctcaat 721 ccaatgccct cggcctcggc gtcgtcccct ctgccacccc ctctgccagc catctgcttt 781 tcctcagctc cactcctgga cttgcctgct ggctacaaac tggggtcctc ggcttttgag 841 ccctacagca gactagaaca acagaaagta ggcagccctg gccaaagtga caagaaagct 901 gacatttaag agtcccatcc ctgtgtgaca cttgagtccc cagcagagca ctaccctagc 961 ctcctggccc ccgtggacta tactgagcag gcctggaaga ggaagggtgg gcacagcatg 1021 cgcatgtgcc tctccacctg ccctcagctc agagactgaa ccaaatgact ttggtcctaa 1081 tgtactttct gatgtgtgag tgctagctat gtgcacctat gcgtgtgcgt gtgcgtgtgc 1141 gtgtgcgtgt gcgtgtgcgt gtgcgtgtgt gtgtgtgtgt ctgagtatgt atgtgtcact 1201 gaaataaaaa agggaactgg tcccagcatc accaactcaa aaaaaaaaaa aaaaaaaaaa 1261 a //