LOCUS BC089224 2491 bp mRNA linear ROD 15-JUL-2006 DEFINITION Rattus norvegicus lysyl oxidase-like 1, mRNA (cDNA clone MGC:105563 IMAGE:7309311), complete cds. ACCESSION BC089224 VERSION BC089224.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 2491) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2491) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-JAN-2005) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Drs. Josef Lazar & Howard Jacob, Medical College of Wisconsin cDNA Library Preparation: Express Genomics cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 203 Row: b Column: 4 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58865819. FEATURES Location/Qualifiers source 1..2491 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:105563 IMAGE:7309311" /tissue_type="Ovary, rat" /clone_lib="NIH_MGC_252" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..2491 /gene="Loxl1" /db_xref="GeneID:315714" /db_xref="RGD:1308752" CDS 314..2140 /gene="Loxl1" /codon_start=1 /product="lysyl oxidase-like 1" /protein_id="AAH89224.1" /db_xref="GeneID:315714" /db_xref="RGD:1308752" /translation="MALAGAGSQLGTLVWGACLCVLVHGQQEQPGQGSDPGRWRQLIQ WENNGQVYSLLNSGSEYVPAGPQRGESSSRVLLAGAPQTSQRRSQGGPRRRQAPNLPL PGRVGSDTVRGQTRHPFGFGQVPDNWREVAVGDSNGMARARTSVSQQRHGGSASSSVS ASAFATTYRQPSSYPQQFPYPQAPFVNQYENYDPASRTYEQGYVYYRGAGGGMGAGAA AAAVASAGVIYPFQPRARYEEYGGGGEEQPEYPAQGFYPAPERPYAPQPQPQPQPQPQ PQPQPSDGLDRRYSHSLYNEGTPGFEQAYPDPSTDVSQIPAGAGGTYGAAGDPRLGWY PPYAANVPPEAYVPPRAVEPQPPFRVLEPPYLPVRNSDAPSQGGERNGAQQGRLSVGS VYRPNQNGRGLPDLVPDPNYVQASTYVQRAHLYSLRCAAEEKCLASTAYAPEATDYDL RVLLRFPQRVKNQGTADFLPNRPRHTWEWHSCHQHYHSMDEFSHYDLLDASTGKKVAE GHKASFCLEDSTCDFGNLKRYACTSHTQGLSPGCYDTYNADIDCQWIDITDVQPGNYI LKVHVNPKYIVLESDFTNNVVRCNIHYTGRFVSTTNCKIVQS" BASE COUNT 518 a 821 c 731 g 421 t ORIGIN 1 aagcgccagc ctagagagca gccagccagt gtggggttgg ccatgtaagg gccccaggag 61 gtcctgcccg tcccgtgccc tgcggaaagc ctcgtgcagc cctgggcacc gcccctgccc 121 tgccctgacc ccttggcctc aaaatgctgt catcggagga gccgtcccgc tcgggacaag 181 gccaggatgg acaaagctag agcttgggca ggcgaggagc catcctgtcc tcgaggccgt 241 gggaagagaa gcacgcaccg gggcccactc ctgagagcct ctccgcccac ccggcctctg 301 cagaagggcc actatggctc tggccggagc cggcagccag ctggggaccc tggtgtgggg 361 agcctgcctg tgcgtcctgg tgcacgggca gcaagagcag ccaggacagg gctcggaccc 421 aggacgctgg cggcagctga tccagtggga gaacaacggg caggtgtaca gcttgctcaa 481 ttcgggctct gagtacgtgc ctgcggggcc ccaaagaggg gagagtagct ccagggtgct 541 actggcaggc gcgccccaaa cgtcgcagcg gcgcagtcag ggaggacccc ggcgtcggca 601 ggcgccgaac ctgcccctgc ccggacgcgt gggttcggac actgtgcgcg gccaaacgcg 661 gcacccgttc ggcttcggcc aggtgccaga caactggaga gaggtggccg tcggggacag 721 taacgggatg gctcgggccc gcacctccgt ctcccagcaa cggcacgggg gctccgcctc 781 ctcctcggtt tcggcctcgg ccttcgccac cacttatcgc cagccatcct cctacccgca 841 gcagttcccc tatccgcagg cgcccttcgt gaaccaatat gagaactatg accccgcgtc 901 gcggacctat gaacagggct acgtgtacta ccgcggtgcg ggcggaggca tgggcgcagg 961 ggcggcggcg gcagctgtag cctcggctgg ggtcatctat cccttccagc cccgggcacg 1021 ctacgaggag tacggcggtg ggggcgagga acagcccgag tacccggcgc agggcttcta 1081 cccagcccca gagaggccct atgcgcccca gccccagcct cagccccaac ctcagccgca 1141 gcctcagccc caaccttccg acggccttga ccgtcgttac tcgcatagcc tgtacaatga 1201 aggcaccccg ggattcgagc aggcctaccc tgatcccagc accgacgtgt cgcagatccc 1261 cgccggggcc ggtggcacct acggtgccgc tggcgatccc cgtctcggct ggtacccgcc 1321 ctatgcagcc aatgtgcctc ccgaggccta tgtccctccg cgtgcggtgg agccgcagcc 1381 cccattccgc gtgctggaac caccttactt gcctgtgcga aactctgatg cgccctccca 1441 gggtggggag aggaacggtg cccagcaggg ccgtctcagc gtgggtagtg tgtaccgacc 1501 taaccagaat ggtcgcggcc tccctgactt agtcccagat cccaactacg tgcaggcatc 1561 cacatatgtg cagagagccc atctgtattc cttgcgttgt gcggcagagg agaagtgcct 1621 ggccagcaca gcctatgctc ctgaggccac cgactatgac ctccgagtgc tgttacgatt 1681 cccccagcgt gtgaaaaacc agggcacggc ggacttcctc cccaaccggc cacgccacac 1741 ctgggagtgg catagctgtc accaacatta ccacagcatg gacgagttca gccactatga 1801 cctacttgat gcatccacgg gcaagaaagt tgccgaggga cacaaggcca gcttttgcct 1861 ggaggacagc acctgtgact tcggcaacct caagcgctat gcgtgcacct cacacacgca 1921 gggcctgagt ccaggctgct atgacaccta caatgcggac atcgactgcc agtggatcga 1981 cataacagat gtgcagcctg ggaactacat cctcaaggtg cacgtgaacc ccaagtacat 2041 tgttctggag tctgacttca ccaacaacgt ggtgagatgc aacatccact acacaggtcg 2101 cttcgtctct acaacaaact gcaaaatcgt ccagtcctga tctcagtgga cggagccccc 2161 cttgtctccc cttgaaaagc aggacctgct tccaggcagc ctcccccaag aagcatagcc 2221 gcctagccgg agggcgaggg cagctggccg ctggggcatc cctccctgcc ggcctcaggg 2281 agtgaacatg gaccaaaccc acagggattc tggatgccag accccgtttt gtacctaagt 2341 ctcctctaca acaccatttt gtctgttgtt ggttttaatt ttgatgtttt ggccatccca 2401 cacagcaaga ttgcccgggt gcttaataaa acaagggttt tctagtctgg aaaaaaaaaa 2461 aaaaaaaaaa aaaaaaaaaa aaaaaaaaag g //