LOCUS BC085615 1974 bp mRNA linear HUM 03-JAN-2005 DEFINITION Homo sapiens breast cancer 1, early onset, mRNA (cDNA clone IMAGE:6042052), partial cds. ACCESSION BC085615 VERSION BC085615.1 KEYWORDS . SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1974) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1974) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (01-NOV-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: ATCC cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 200 Row: b Column: 18 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6552298. FEATURES Location/Qualifiers source 1..1974 /db_xref="H-InvDB:HIT000266119" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="IMAGE:6042052" /tissue_type="Testis, embryonal carcinoma" /clone_lib="NIH_MGC_92" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..>1974 /gene="BRCA1" /gene_synonym="BRCAI" /gene_synonym="IRIS" /gene_synonym="PSCP" /gene_synonym="RNF53" /db_xref="GeneID:672" /db_xref="MIM:113705" CDS 103..>1974 /gene="BRCA1" /gene_synonym="BRCAI" /gene_synonym="IRIS" /gene_synonym="PSCP" /gene_synonym="RNF53" /codon_start=1 /product="BRCA1 protein" /protein_id="AAH85615.1" /db_xref="GeneID:672" /db_xref="MIM:113705" /translation="MDLSALRVEEVQNVINAMQKILECPICLELIKEPVSTKCDHIFC KFCMLKLLNQKKGPSQCPLCKNDITKRSLQESTRFSQLVEELLKIICAFQLDTGLEYA NSYNFAKKENNSPEHLKDEVSIIQSMGYRNRAKRLLQSEPENPSLETSLSVQLSNLGT VRTLRTKQRIQPQKTSVYIELGSDSSEDTVNKATYCSVGDQELLQITPQGTRDEISLD SAKKAACEFSETDVTNTEHHQPSNNDLNTTEKRAAERHPEKYQGEAASGCESETSVSE DCSGLSSQSDILTTQQRDTMQHNLIKLQQEMAELEAVLEQHGSQPSNSYPSIISDSSA LEDLRNPEQSTSEKAVLTSQKSSEYPISQNPEGLSADKFEVSADSSTSKNKEPGVERS SPSKCPSLDDRWYMHSCSGSLQNRNYPSQEELIKVVDVEEQQLEESGPHDLTETSYLP RQDLEGTPYLESGISLFSDDPESDPSEDRAPESARVGNIPSSTSALKVPQLKVAESAQ SPAAAHTTDTAGYNAMEESVSREKPELTASTERVNKRMSMVVSGLTPEEFMLVYKFAR KHHITLTNLITEETTHVVMKTDAEFVCERTLKYFLGIAGGKWVVSYFWVTQSIKKKKK " BASE COUNT 632 a 414 c 443 g 485 t ORIGIN 1 gacttcctgg acgggggaca ggctgtgggg tttctcagat aactgggccc ctgcgctcag 61 gaggccttca ccctctgctc tggttcattg gaacagaaag aaatggattt atctgctctt 121 cgcgttgaag aagtacaaaa tgtcattaat gctatgcaga aaatcttaga gtgtcccatc 181 tgtctggagt tgatcaagga acctgtctcc acaaagtgtg accacatatt ttgcaaattt 241 tgcatgctga aacttctcaa ccagaagaaa gggccttcac agtgtccttt atgtaagaat 301 gatataacca aaaggagcct acaagaaagt acgagattta gtcaacttgt tgaagagcta 361 ttgaaaatca tttgtgcttt tcagcttgac acaggtttgg agtatgcaaa cagctataat 421 tttgcaaaaa aggaaaataa ctctcctgaa catctaaaag atgaagtttc tatcatccaa 481 agtatgggct acagaaaccg tgccaaaaga cttctacaga gtgaacccga aaatccttcc 541 ttggaaacca gtctcagtgt ccaactctct aaccttggaa ctgtgagaac tctgaggaca 601 aagcagcgga tacaacctca aaagacgtct gtctacattg aattgggatc tgattcttct 661 gaagataccg ttaataaggc aacttattgc agtgtgggag atcaagaatt gttacaaatc 721 acccctcaag gaaccaggga tgaaatcagt ttggattctg caaaaaaggc tgcttgtgaa 781 ttttctgaga cggatgtaac aaatactgaa catcatcaac ccagtaataa tgatttgaac 841 accactgaga agcgtgcagc tgagaggcat ccagaaaagt atcagggtga agcagcatct 901 gggtgtgaga gtgaaacaag cgtctctgaa gactgctcag ggctatcctc tcagagtgac 961 attttaacca ctcagcagag ggataccatg caacataacc tgataaagct ccagcaggaa 1021 atggctgaac tagaagctgt gttagaacag catgggagcc agccttctaa cagctaccct 1081 tccatcataa gtgactcttc tgcccttgag gacctgcgaa atccagaaca aagcacatca 1141 gaaaaagcag tattaacttc acagaaaagt agtgaatacc ctataagcca gaatccagaa 1201 ggcctttctg ctgacaagtt tgaggtgtct gcagatagtt ctaccagtaa aaataaagaa 1261 ccaggagtgg aaaggtcatc cccttctaaa tgcccatcat tagatgatag gtggtacatg 1321 cacagttgct ctgggagtct tcagaataga aactacccat ctcaagagga gctcattaag 1381 gttgttgatg tggaggagca acagctggaa gagtctgggc cacacgattt gacggaaaca 1441 tcttacttgc caaggcaaga tctagaggga accccttacc tggaatctgg aatcagcctc 1501 ttctctgatg accctgaatc tgatccttct gaagacagag ccccagagtc agctcgtgtt 1561 ggcaacatac catcttcaac ctctgcattg aaagttcccc aattgaaagt tgcagaatct 1621 gcccagagtc cagctgctgc tcatactact gatactgctg ggtataatgc aatggaagaa 1681 agtgtgagca gggagaagcc agaattgaca gcttcaacag aaagggtcaa caaaagaatg 1741 tccatggtgg tgtctggcct gaccccagaa gaatttatgc tcgtgtacaa gtttgccaga 1801 aaacaccaca tcactttaac taatctaatt actgaagaga ctactcatgt tgttatgaaa 1861 acagatgctg agtttgtgtg tgaacggaca ctgaaatatt ttctaggaat tgcgggagga 1921 aaatgggtag ttagctattt ctgggtgacc cagtctatta aaaaaaaaaa aaaa //