LOCUS BC083582 1824 bp mRNA linear ROD 15-JUL-2006 DEFINITION Rattus norvegicus claudin 4, mRNA (cDNA clone MGC:94208 IMAGE:7130270), complete cds. ACCESSION BC083582 VERSION BC083582.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 1824) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1824) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-OCT-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Howard Jacobs cDNA Library Preparation: Express Genomics cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 184 Row: h Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 58865611. FEATURES Location/Qualifiers source 1..1824 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:94208 IMAGE:7130270" /tissue_type="Kidney, rat (Brown Norway)" /clone_lib="NIH_MGC_236" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..1824 /gene="Cldn4" /db_xref="GeneID:304407" /db_xref="RGD:1307932" CDS 192..824 /gene="Cldn4" /codon_start=1 /product="claudin 4" /protein_id="AAH83582.1" /db_xref="GeneID:304407" /db_xref="RGD:1307932" /translation="MASMGLQVLGISLAVLGWLGVILSCSLPMWRVTAFIGSNIVTAQ TSWEGLWMNCVVQSTGQMQCKMYDSMLALPQDLQAARALMVISIIVGALGMLLSVVGG KCTNCMEDETVKAKVMITAGAVFIVASMLIMVPVSWTAHNVIRDFYNPLVASGQKREM GASLYIGWAASGLLLLGGGLLCCNCPPRRNEKPYSAKYSAARSVPASNYV" BASE COUNT 355 a 511 c 522 g 436 t ORIGIN 1 ccgctcccaa ttgcaggtgc gggctggaaa gagctgcagt gttcgcgctt ggtagctggt 61 ggaccgggct cagcaccttc ggctggcttt gtgtcccaga ggctcaccgg aaaaagactt 121 tctcagccct cggactccag agagagatac ttttcgtgct ccccaacctt gactcctgca 181 gaagctgagc gatggcgtcc atggggctgc aggtgctggg aatctccttg gccgtcctgg 241 gctggttagg agtcatcctg agttgttcgc tccccatgtg gcgggtgacc gccttcatcg 301 gcagcaacat cgtcacggcg cagacgagct gggaaggcct gtggatgaac tgcgtggtgc 361 agagcaccgg ccagatgcag tgcaagatgt acgactcgat gctggccctg ccgcaggacc 421 tgcaggccgc ccgagccctg atggtcatca gcatcatcgt gggtgctctg gggatgcttc 481 tctcagtcgt agggggcaag tgcaccaact gcatggagga cgagaccgtc aaggccaagg 541 tcatgatcac agccggagcc gtgttcatcg tggcaagcat gctgattatg gtgcctgtgt 601 cctggacggc acacaacgtc atccgcgact tctacaaccc tctggtggct tccgggcaga 661 aaagggagat gggggcctcg ctttacatcg gctgggcggc ttctgggctg ctgctcctgg 721 gaggaggcct cctctgctgc aattgcccac ctcgccgcaa cgaaaagccc tactccgcca 781 agtactccgc cgcccgctct gttcccgcca gcaactatgt gtaaggtggg ccactctctg 841 tccacattgc ctttattttc ttggattgaa ctcataacgg cctgtggccc ctcacattct 901 ccaggacctg accagctgtg ggctactgac tgcttgcaaa cccggactgt gctaagttac 961 tagcgtgtag cccttgggga cccacctggc ccatctggac acatctcaag gctccagcga 1021 ggatagatgt aaaaatattt ccttgcttgc atccagattg ctcatggata cggggctgaa 1081 ggcagaagca gctgtctggg tacgacagtg gagggggagc tgggtcctgc tggccgggat 1141 agctcagctg tgactttggt ctctggagtg gatgtcctgg tcatgttagc aaacattcac 1201 tgccctttct cagtgccctc gctctctcgc ctccacgtta ctcccgcgct actcttgccg 1261 tttctcgccc gcgtttctga gcacaccagg tcctgcctgg agtcttggtg tcgaggatga 1321 ctgactgaag gggcctttga gagctgatgg gttctgccat ggactcctcc cggtgattag 1381 caatgactgg ggccttaccc acccacctac cctcgtaatg aagttctgtg gagtggctgg 1441 acaggtttga gggaagggtg gaggtggttt aaactggttt ggggagtgct agggctgggg 1501 acccagaagc agcccagggt gtccccaccc ctttcccata cggtcttgct aaatgttctg 1561 atctctgtat accccctccc tcttcagaag gaccctgggt gggcccctct gaattcccta 1621 cccttgtcca tttcaaggac gctggccagt ctgtggaagg tacgggggtc tgatggcatt 1681 gcaccaggga gcctcctgga ctcccttgcc ttctctgtgg tttcttgttt tgtaatttaa 1741 ggtctgttca cagctgtaat tattattttc tacaataaat ggcacctgca tacaggaaaa 1801 aaaaaaaaaa aaaaaaaaaa aaaa //