LOCUS BC082556 2006 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus RAD9 homolog (S. pombe), mRNA (cDNA clone MGC:100350 IMAGE:30538342), complete cds. ACCESSION BC082556 VERSION BC082556.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2006) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2006) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (15-SEP-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: Plate: Row: Column: 0 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 6755281. FEATURES Location/Qualifiers source 1..2006 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:100350 IMAGE:30538342" /tissue_type="Eye" /clone_lib="NIH_BMAP_GW0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..2006 /gene="Rad9" /db_xref="GeneID:19367" /db_xref="MGI:MGI:1328356" CDS 27..1196 /gene="Rad9" /codon_start=1 /product="RAD9 homolog (S. pombe)" /protein_id="AAH82556.1" /db_xref="GeneID:19367" /db_xref="MGI:MGI:1328356" /translation="MKCLITGGNVKVLGKAVHSLSRIGDELYLEPLKDGLSLRTVNSS RSAYACFLFAPLFFQQYQAASPGQDLLRCKILMKAFLSVFRSLAIVEKSVEKCCISLS GSHSHLVVQLHCKYGVKKTHNLSFQDCESLQAVFDPASCPHLLRTPARVLAEAVLSFP LALTEVTLGIGRGRRVILRSYQEEEADSTSKAMVTETSIGDEDFQQLHAPEGIAVTFC LKEFRGLLSFAESANLPLTIHFDVPGRPVIFTIEDSLLDAHFVLATLLEQDSCSQGPC SPKPHQPVPQKQAHSTPHLDDFTSDDIDCYMIAMETTGGNEGSGAQPSTSLPPVSLAS HDLAPTSEEEAEPSTVPGTPPPKKFRSLFFGSILAPVHSPQGPNPVLAEDSDGEG" BASE COUNT 446 a 588 c 498 g 474 t ORIGIN 1 aagctcgatt tttgtgctta tgtactatga agtgcctgat caccgggggc aacgtgaagg 61 tgctgggcaa ggctgtccat tcgctatccc gaatcgggga cgagctctat ctggaaccct 121 tgaaggacgg gctctcccta cggactgtga actcgtcccg ttctgcctat gcctgcttcc 181 tttttgcccc actcttcttc cagcagtacc aggcggcttc ccctggtcag gacctgctgc 241 gctgtaagat cctgatgaag gccttcctgt ccgtcttccg ctctctggca attgtggaga 301 agtctgtgga gaagtgctgt atctccctca gtggcagcca cagccacctg gtggtccagc 361 tccactgcaa gtatggggtc aagaagacac acaacctctc cttccaggac tgtgagtccc 421 tgcaggctgt cttcgaccca gcctcatgcc ctcacttatt gcgcacccca gcacgggttc 481 tggcagaggc tgttctgtcc tttccccttg cattgactga ggtgacactg ggcattggcc 541 gtggccggcg ggtcatcctg cgcagctacc aggaagagga ggcagacagc accagcaaag 601 ccatggtgac tgagaccagc attggggatg aggacttcca gcagctgcat gccccagaag 661 ggatagctgt caccttctgc ctcaaggaat ttcgggggct cctgagcttt gcagagtcag 721 cgaatttgcc tcttactatc cacttcgatg ttccaggcag gccagtcatc tttactattg 781 aggattcctt gctggatgcc cactttgtct tggccacact cttagagcaa gactcatgtt 841 cccagggccc gtgttcccca aaaccccacc agccagtgcc tcagaagcag gcacacagca 901 caccccactt agatgacttt accagtgatg acattgactg ttacatgatt gccatggaaa 961 ccactggagg caatgagggc tccggggcac agccttccac atccctccca cctgtctccc 1021 tggcctccca tgaccttgcc cccacctcag aggaggaagc tgagcccagt acagtgcctg 1081 ggactccccc acccaagaag tttcgttcac tgttctttgg ctccatcctg gcccctgtac 1141 actccccgca gggtcccaac cctgtgctgg ctgaagacag tgatggtgaa gggtgaattt 1201 gagaaattaa agtctgtgtt caaaggctca cggaccagaa gcaggcccgc ccactgagtt 1261 gggcgtcagt ccttagacat ggacatggaa atggaaaaag gcatacccca cttggctgtc 1321 tgctgcagag ctgcctagga accatgtttg gtctgtgttc tgtatttatt cagcctatac 1381 caatcatgtc tctggtgccc acctgtcacc tgacagatcc ctcatccttt actttgaggc 1441 tctagaatac aaattctggc caaagccaga aacttagctt cctcagtctc ctgcctctaa 1501 aacaggaaga tcagtattga acaccctctg ccaatcatga actccccgcc agaccctcct 1561 gtgggccaaa ggaactgttt ctctttccta acacttgggc cttggcctag aatcctaata 1621 gcctctggac ctgattgtgt gtcactggtg ttgccctggc tgggcccatg ttcagccact 1681 cagtctgccc tcccaggtgg ctttgtacca aagaactgct ggcccactgt ctgggacggg 1741 acaagagaga cagaggctat ggtgagaatc cagctttgac ctttattcaa gagaccagat 1801 gggttgcccc aggatctggc tgccagccat gcaaggctgg agacccacaa tctggtctgc 1861 cattgccctg agctgcagcc ttggccccag gattccactt gcagccacca caggtgctgg 1921 tgggagggag ccctgggaga ttagatgctg ctattgattc tttaaaaaat aaaggaaaga 1981 cacttaaaaa aaaaaaaaaa aaaaaa //