LOCUS BC081782 3398 bp mRNA linear ROD 15-JUL-2006 DEFINITION Rattus norvegicus protein kinase C, eta, mRNA (cDNA clone MGC:93383 IMAGE:7123785), complete cds. ACCESSION BC081782 VERSION BC081782.1 KEYWORDS MGC. SOURCE Rattus norvegicus (Norway rat) ORGANISM Rattus norvegicus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Rattus. REFERENCE 1 (bases 1 to 3398) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3398) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-SEP-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Howard Jacobs cDNA Library Preparation: Express Genomics cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 183 Row: i Column: 8 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 52138606. FEATURES Location/Qualifiers source 1..3398 /organism="Rattus norvegicus" /mol_type="mRNA" /db_xref="taxon:10116" /clone="MGC:93383 IMAGE:7123785" /tissue_type="Lung, rat (Brown Norway)" /clone_lib="NIH_MGC_232" /lab_host="DH10B" /note="Vector: pExpress1" gene 1..3398 /gene="Prkch" /db_xref="GeneID:81749" /db_xref="RGD:621888" CDS 188..2239 /gene="Prkch" /codon_start=1 /product="protein kinase C, eta" /protein_id="AAH81782.1" /db_xref="GeneID:81749" /db_xref="RGD:621888" /translation="MSSGTMKFNGYLRVRIGEAVGLQPTRWSLRHSLFKKGHQLLDPY LTVSVDQVRVGQTSTKQKTNKPTYNEEFCTNVSDGGHLELAVFHETPLGYDHFVANCT LQFQELLRTAGTSDTFEGWVDLEPEGKVFVVITLTGSFTEATLQRDRIFKHFTRKRQR AMRRRVHQVNGHKFMATYLRQPTYCSHCREFIWGVFGKQGYQCQVCTCVVHKRCHHLI VTACTCQNNINKVDAKIAEQRFGINIPHKFNVHNYKVPTFCDHCGSLLWGIMRQGLQC KICKMNVHIRCQANVAPNCGVNAVELAKTLAGMGLQPGNISPTSKLISRSTLRRQGKE GSKEGNGIGVNSSSRFGIDNFEFIRVLGKGSFGKVMLARIKETGELYAVKVLKKDVIL QDDDVECTMTEKRILSLARNHPFLTQLFCCFQTPDRLFFVMEFVNGGDLMFHIQKSRR FDEARARFYAAEIISALMFLHEKGIIYRDLKLDNVLLDHEGHCKLADFGMCKEGICNG VTTATFCGTPDYIAPEILQEMLYGPAVDWWAMGVLLYEMLCGHAPFEAENEDDLFEAI LNDEVVYPTWLHEDATGILKSFMTKNPTMRLGSLTQGGEHEILRHPFFKEIDWVQLNH RQLEPPFRPRIKSREDVSNFDPDFIKEEPVLTPIDEGHLPMINQDEFRNFSYVSPELQ P" BASE COUNT 863 a 894 c 891 g 750 t ORIGIN 1 gggaaggagg ggaggggaag gtccctcgga ggaggcggaa tggccggtcg cagggggctt 61 gggtgctgct tctcccggga gctgcctcca cgagcgtggc tgcggagagg actgccttga 121 gcccgggctc tccgttcccc ggtgccagcc agcccggccc cctcggggct ccggcagcag 181 cgccagcatg tcgtccggca cgatgaagtt caatggctat ctgagggtcc gcatcggaga 241 ggcagtgggg ctgcagccca cccgctggtc cctgcggcac tcgctcttca aaaagggcca 301 ccagctgctg gacccctacc tgacggtgag cgtagaccag gtacgcgtgg gccagaccag 361 cacaaagcag aagactaaca aacccaccta caacgaggag ttctgcacca atgtctccga 421 cggcggccac ctggagctag ccgtcttcca cgagacgccc ctgggctatg accactttgt 481 ggccaactgc acgctgcagt tccaggagct gttgcgcacg gccggcacat cggacacctt 541 cgagggctgg gtggatctgg agcctgaggg gaaagtgttc gtggtaataa ccctaacagg 601 gagcttcact gaagccactc tccagagaga ccgcatcttc aagcatttta ccaggaagcg 661 ccaacgggct atgcgaagga gagtccatca agtcaacgga cacaagttca tggccacata 721 cctgaggcag cccacctact gctctcactg ccgggagttc atctggggag tatttgggaa 781 acagggttat caatgccaag tgtgcacctg cgtcgtccat aaacgctgcc atcacctaat 841 tgttacagcc tgcacttgcc aaaacaatat taacaaagtg gatgccaaga tcgcagagca 901 acggtttggc atcaacatcc cacacaagtt caacgttcac aactacaagg tgcccacgtt 961 ctgcgaccac tgtggctccc tgctctgggg gataatgcga caaggacttc agtgtaaaat 1021 atgtaagatg aacgtacata ttcggtgtca ggcgaacgtg gccccaaact gcggggtgaa 1081 cgccgtggag cttgccaaga ccctggcagg gatgggtctc caacccggaa atatttctcc 1141 aacctcgaaa ctcatttcca ggtctacgct gagacggcag gggaaggagg gctccaaaga 1201 aggaaatggg atcggtgtta attcttccag cagattcggc atcgacaact ttgagttcat 1261 ccgggtgttg gggaagggga gcttcgggaa ggtgatgctc gccagaataa aggagacagg 1321 agagctgtac gctgtgaagg tgctgaagaa ggacgtcatc ctgcaggatg acgatgtgga 1381 atgcaccatg actgagaaga ggatcctctc cttggcccgc aaccacccct tcctcaccca 1441 gctcttctgc tgctttcaga ctcctgaccg tctgttcttt gtcatggagt ttgtgaacgg 1501 aggtgacctg atgttccaca tccaaaagtc caggcgtttc gatgaagccc gagctcgttt 1561 ctacgctgca gagatcattt ctgcactcat gttcctccac gagaaaggca tcatctacag 1621 agacttgaaa ctggacaacg tactactgga ccacgaaggc cactgtaaac tggccgactt 1681 cggaatgtgc aaggagggca tttgtaacgg ggtcaccaca gccaccttct gcggcacgcc 1741 tgactacatt gccccagaga tccttcagga gatgttgtat ggacctgcag tagactggtg 1801 ggccatgggc gtgttgcttt atgagatgct gtgcggacat gcgcccttcg aggctgagaa 1861 tgaagatgac ctttttgagg ccatactgaa tgatgaagtt gtctacccta cctggctcca 1921 tgaagatgcc acagggatcc tcaaatcttt catgaccaag aaccccacca tgcgcttggg 1981 cagcctgact cagggaggcg agcatgagat cttgagacat cctttcttta aggaaatcga 2041 ctgggtccag ttgaaccatc gccagctaga accgcctttc cgacccagaa tcaaatcccg 2101 agaagacgtc agcaattttg acccagactt cataaaagaa gagcctgttt taactccgat 2161 cgatgaggga catcttccta tgattaacca ggatgagttt agaaactttt cctatgtgtc 2221 accagaattg caaccgtagc cttatgggaa gcaacaaaga gaaaggggga tctttccaga 2281 gatttcttgt gtgggaagtc cccagctcct gccttttaac accaccttca ccttcacgga 2341 gcaaatgttc acaactctgc gaagggcgga gcctcaagag agccactctg tcaagtcccg 2401 gggagccatg gtacacttcg gtagttgata ctgaggtaag atgttacaga gacgtgcacc 2461 gcccaccccg gagtctccat ggctttcagg cttggagtaa aggacagaag ccaaaagaag 2521 agatgctggg taacacagga ggtcctaggg atcctcagcc aaacaggctt cttgttttta 2581 acttcaagag acaaatctag actttccgtg gagcacccca cactgttctt cacgccaata 2641 gtgcagtctg cgaaagatca aatgctgatg aagaagttaa aagtctctct agggaaacgg 2701 acggcattct aagcagactg attcgcttcg aagaaaccgc agttgggcgt ccttcaagct 2761 cccaacctaa acccagtgtt gagaacagag gttggacacc acgacgacct ctgttgtctt 2821 gacaacagct caagtgtctt gagtctcttc cttccagtaa ctagatattt attgagtgtc 2881 aaataaaaag gtgccatact cttcagtagt gtacacggta gagtcacctt catgatgcct 2941 ttactcgttc tggggtccac ctaatggtgt tcgcactctg cgaaaggcct ctccacattg 3001 catataggtc tgtcttcttt gtctcctgtt catagaaggg ccaccaccac agtagtgcgg 3061 tcagcaggcg ggcttccgct gcatgccacc tgctgactgg ccggtggaat ctaatctcca 3121 catccttcat cccacgtcga ctcattggcg aagaagtccg tgccactccc atcctcgaac 3181 acgtgtgtgg caggtccatc ggccgcctac ttgagttatg tttcagagac aaagaaggtt 3241 gtttgatact cacattaata agaagctctg ggtcttgtaa acaaggccga cgacagaggt 3301 gtaccttttc atgtgtaacc atatatacag ttgaaaaaat tttatctggc tggaaataaa 3361 ggcatttttt agcaaaaaaa aaaaaaaaaa aaaaaaaa //