LOCUS BC078068 1653 bp mRNA linear VRT 14-APR-2006 DEFINITION Xenopus laevis rac-2 protein, mRNA (cDNA clone MGC:82924 IMAGE:5514055), complete cds. ACCESSION BC078068 VERSION BC078068.1 KEYWORDS MGC. SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 1653) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 1653) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 1653) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Igor Dawid cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 155 Row: b Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 50603707. FEATURES Location/Qualifiers source 1..1653 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /clone="MGC:82924 IMAGE:5514055" /tissue_type="Embryo, stage 31/32, Xenopus" /clone_lib="NICHD_XGC_Emb4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1653 /gene="rac-2" /gene_synonym="MGC82924" /db_xref="GeneID:493579" CDS 44..775 /gene="rac-2" /gene_synonym="MGC82924" /codon_start=1 /product="rac-2 protein" /protein_id="AAH78068.1" /db_xref="GeneID:493579" /translation="MPPQELSVDYTSHFAPPVPPHKPKPVAASCGQERILKCVLLGDG AVGKTSLLVSYTTNGYPTRYIPTAFDDFSALVQVENTPVKLQLCDTAGQDEFDKLRHF CYPKTDVVILCFSVVSPSSFQNISEKWITEIQSHCPNVPVVLIGTQCDLREDVKVLIQ LARYQEKPVSNSSARALAEKIGAVAYVECSALTQKNLKEVFDTAIISGLRYSDLRGQR ERKMAATANKMKTLSKAWWKKYVCV" BASE COUNT 470 a 352 c 342 g 489 t ORIGIN 1 gatctccctt ggttaatgca gacggctccc atctgatgaa gacatgcccc ctcaagaact 61 ttccgtggat tacacttccc actttgcacc ccctgtgcca ccccacaaac ccaaaccagt 121 ggcagcgtcc tgcggccagg agcggatcct gaaatgcgtg ctgctcggag atggggcggt 181 tggcaagacc agccttctag tgagttacac tactaacggc tacccgaccc gctacatccc 241 tacggctttc gatgatttct cagcactggt gcaggtcgaa aatactcctg tgaaacttca 301 gctctgtgat acagcaggac aggatgagtt tgacaagcta cgccatttct gttatccaaa 361 gacagatgtt gtgattcttt gcttcagtgt tgtcagccca tcctccttcc agaatatctc 421 tgaaaaatgg ataacagaga tacagagtca ctgtcccaat gtgccagttg tgctaattgg 481 gactcagtgt gacctccgtg aagatgtcaa agttctcatt cagcttgctc ggtaccagga 541 gaagcctgtg tctaactctt ctgctagggc tcttgctgaa aagattggtg ctgtagccta 601 cgtggagtgc tccgctttga cccaaaagaa ccttaaagaa gtctttgata cagcaataat 661 ttctggtttg cgctactcag atctaagggg acagagagag aggaaaatgg ctgccactgc 721 caacaagatg aaaactcttt caaaggcatg gtggaaaaag tatgtgtgtg tctgagggta 781 agaaccatac ttcatgatgc acacagaaga ccaatatgcc agactttctg ctgaagtgtt 841 ggcaattaaa caacacaacc atttttttct gcaggaagcc aaaattgaag gagaagtggg 901 gagtcttttt ttgctgccaa tttatagaca aaatctcttt tttcatgaga agcagttaaa 961 ctttatttcc aacatgatca agattcaaat tgtagacttt ctatatattt ttcacttgta 1021 agaataaaat atgctcgtgg gaccaattgc tccctcccaa acatcggaac aggaaatgca 1081 taatctaaaa gcaatataca ccttcagctc ttgtgaacat tgggcaggga ttgctgctgt 1141 tagtcattac aaaggtcgag gccttgctcc atatcagaaa aggagacatt ttgctggttt 1201 atttaatctg tctcttagct gaggtggatg ttattccaat actgcttcta tttttagaag 1261 cgtgcagtat tttaagatat tatattaaca ctggtgggtg ccatgtgtct gtgttgtgga 1321 gggctctaca caaaagatta tatatccttt ttttattact gataaccaaa ctgaggttct 1381 acatctgttt gtaaactaca atttctagca tccctttaac taggggttta tagtaagaaa 1441 gcagggttga tgtccaccca gttgcttcta accccaatta ttttaatttt atgtgtaacc 1501 gattccctct gcatcacagt ccaggctcca tgacataata ctccagttat atctgcttta 1561 taagcagctg cttgggagac cacattgatt taatgtgatt ttgttttgga aataaaatta 1621 cattttaata atatatttaa aaaaaaaaaa aaa //