LOCUS BC078038 1057 bp mRNA linear VRT 12-OCT-2004 DEFINITION Xenopus laevis histone 1, H4l, mRNA (cDNA clone MGC:82777 IMAGE:5161621), complete cds. ACCESSION BC078038 VERSION BC078038.1 KEYWORDS MGC. SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 1057) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 1057) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 1057) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (19-JUL-2004) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Martha Rebbert, Steven L. Klein, Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield, Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin, Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu, Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 153 Row: p Column: 5 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1057 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /clone="MGC:82777 IMAGE:5161621" /tissue_type="Embryo, stage 10" /clone_lib="NICHD_XGC_Emb1" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1057 /gene="hist1h4l-prov" /gene_synonym="MGC82777" /db_xref="GeneID:447787" CDS 12..323 /gene="hist1h4l-prov" /gene_synonym="MGC82777" /codon_start=1 /product="hist1h4l-prov protein" /protein_id="AAH78038.1" /db_xref="GeneID:447787" /translation="MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGV KRISGLIYEETRGVLKVFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFG G" BASE COUNT 304 a 270 c 233 g 250 t ORIGIN 1 ctgaagagag aatgtccggc cgcggcaaag gaggaaaagg actggggaaa ggaggcgcca 61 agcggcacag gaaggtgctc agggataaca tccagggcat caccaagccc gccatccgcc 121 gcctggcacg gagaggggga gtcaagcgca tctctggcct catctatgag gagactcgtg 181 gggtcctcaa ggttttcctg gagaatgtca tccgggacgc cgtcacctac acagaacacg 241 ccaagaggaa gaccgttacc gccatggatg tggtgtacgc tctcaagcgc cagggccgca 301 ctctctacgg cttcggcgga taaatctctt ccttcccact aatcttatac ccaaaggctc 361 ttttcagagc cgcccacaca ctcaaatctc tcagctgtta ctgcttgttt tacatattgt 421 gttgcagtga gaaaagcaca agggcaagta atttgtgtta tatttcttgg ctaattctga 481 cgcgttcctg gatcttgcaa tgtaaatcca aggcgatgca ttagaatccc gattaccttt 541 gcttgttctc cactgcggca attctaatgt aatcgtaacg cgtggtgact cacaggccaa 601 cgatcccccg gcaaataaaa ggttaaagtg acgagtctct tgacttgcac aagagccacg 661 ccccttctcc ccataaaatc agttacaggc tctcgggctc ttttgctctt gccggatgga 721 aattactgtt gctgctcagc gtctcacaga actcccccag tcgctttccc actggccccc 781 agatcttaca attatcagta tcagtaatcc cttctttgct tgatgatttt aggcattaga 841 gggaaatcca gaatcccata caaatgtctc acctttgtgc tgctcagatg ttgttgcaca 901 caatgagatc cccccacagc tcagctacaa agctttcccc tcatcaatat aataagaccc 961 agtgttctaa atgttgcttt aatttagcag agagaggggg tgttataaaa aaaaaaaaaa 1021 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaa //