LOCUS BC074741 1106 bp mRNA linear HUM 15-JUL-2006 DEFINITION Homo sapiens leucine-rich repeats and transmembrane domains 1, mRNA (cDNA clone MGC:103818 IMAGE:30915199), complete cds. ACCESSION BC074741 VERSION BC074741.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 1106) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1106) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-JUN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 4, 2004 this sequence version replaced BC074741.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Genome Sequence Centre, British Columbia Cancer Center cDNA Library Preparation: British Columbia Cancer Research Center cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRBU Plate: 1 Row: C Column: 8. FEATURES Location/Qualifiers source 1..1106 /db_xref="H-InvDB:HIT000265248" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:103818 IMAGE:30915199" /tissue_type="Fetal Brain, PCR rescued clones" /clone_lib="NIH_MGC_274" /lab_host="DH10B" /note="Vector: pCR4 Topo TA with reversed insert" gene 1..1106 /gene="LRTM1" /gene_synonym="HT017" /db_xref="GeneID:57408" /db_xref="HGNC:HGNC:25023" CDS 25..1062 /gene="LRTM1" /gene_synonym="HT017" /codon_start=1 /product="leucine-rich repeats and transmembrane domains 1" /protein_id="AAH74741.1" /db_xref="GeneID:57408" /db_xref="HGNC:HGNC:25023" /translation="MKGELLLFSSVIVLLQVVCSCPDKCYCQSSTNFVDCSQQGLAEI PSHLPPQTRTLHLQDNQIHHLPAFAFRSVPWLMTLNLSNNSLSNLAPGAFHGLQHLQV LNLTQNSLLSLESRLFHSLPQLRELDLSSNNISHLPTSLGETWENLTILAVQQNQLQQ LDRALLESMPSVRLLLLKDNLWKCNCHLLGLKLWLEKFVYKGGLTDGIICESPDTWKG KDLLRIPHELYQPCPLPAPDPVSSQAQWPGSAHGVVLRPPENHNAGERELLECELKPK PRPANLRHAIATVIITGVVCGIVCLMMLAAAIYGCTYAAITAQYHGGPLAQTNDPGKV EEKERFDSSPA" BASE COUNT 265 a 308 c 259 g 274 t ORIGIN 1 aaggacgccc aagaagactc agtcatgaaa ggtgaactgc tcctgttttc cagtgtgatt 61 gtcctgctcc aggtggtatg cagctgcccg gacaagtgtt actgtcagtc atctacaaat 121 tttgtagact gcagccagca gggtctggcc gaaatccctt cccatttacc tcctcagact 181 cgaacgctgc atttacaaga taatcagata caccatcttc ctgcttttgc atttaggtca 241 gtgccatggc tcatgacctt aaacttgtcc aacaattccc tttcaaatct ggcccctgga 301 gctttccatg ggcttcagca cttgcaggtt ttaaatctaa cccagaattc actcctttcc 361 ctggaaagca gacttttcca ttccctccct cagctgaggg agcttgattt gtcatcaaac 421 aacataagcc accttcccac atccttggga gagacttggg agaacctaac tatacttgcg 481 gttcaacaaa accagcttca gcagcttgat cgagcgctcc tggaatccat gcccagtgtg 541 aggcttttac ttctcaagga caacctctgg aaatgcaatt gccacttgct cggtcttaaa 601 ctctggctgg agaaatttgt ctataaaggg ggactaacag acggcatcat ctgtgaatca 661 ccagacacct ggaagggaaa ggacctcctt aggatccctc atgagctgta ccagccctgc 721 cctcttcctg ctcctgatcc agtgtcctcg caggctcagt ggcccggctc tgcccacggt 781 gtggtcctga ggcctcctga gaaccacaac gcgggggagc gagaactctt ggagtgcgag 841 ctcaaaccca agccaaggcc ggccaacctg cgtcatgcca ttgccactgt catcatcact 901 ggcgttgtgt gtgggattgt gtgtctcatg atgttggcag ctgccatcta tggctgcacc 961 tatgcggcaa tcacagccca gtaccatggg ggacccttgg ctcaaaccaa tgatcctggg 1021 aaggtggaag aaaaagagcg atttgacagc tcaccagcct gagagctttt gtctcaaata 1081 ggattggtca ttgcaggcca gaagat //