LOCUS BC069939 1602 bp mRNA linear ROD 09-MAR-2007 DEFINITION Mus musculus expressed sequence AI132487, mRNA (cDNA clone MGC:78238 IMAGE:5053384), complete cds. ACCESSION BC069939 VERSION BC069939.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1602) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1602) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (10-MAY-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Jeffrey E. Green, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 148 Row: h Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: Similarity but not identity to protein. FEATURES Location/Qualifiers source 1..1602 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:78238 IMAGE:5053384" /tissue_type="Liver, normal. 5 month old male mouse." /clone_lib="NCI_CGAP_Li9" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1602 /gene="AI132487" /gene_synonym="HDMCP" /db_xref="GeneID:104910" /db_xref="MGI:MGI:2144766" CDS 41..973 /gene="AI132487" /gene_synonym="HDMCP" /codon_start=1 /product="expressed sequence AI132487" /protein_id="AAH69939.2" /db_xref="GeneID:104910" /db_xref="MGI:MGI:2144766" /translation="MDFVAGAIGGVCGVAVGYPLDTVKVRIQTEAKYAGIWHCIRDTY RQERVWGFYRGLSLPVCTVSLVSSVSFGTYHHCLAHICRFRYGSTDAKPTKADITLSG CASGLVRVFLTSPTEVAKVRLQTQTQAQTQQRRSSASWTSGAPALCPTPTACLEPRPK YSGPLHCLVTVAREEGLRGLYKGSSALLLREGHSFATYFLSYAMLCEWLTPAGHSQPD VLGVLVAGGCAGVLAWAVATPMDVIKSRLQADGQGQHRYRGLLHCVVTSVREEGPRVL FKGLALNCCRAFPVNMVVFVAYEAVLRLTQSLLT" BASE COUNT 332 a 450 c 463 g 357 t ORIGIN 1 ggcagtaaca ccggaaacct tctcattttc tgtgctgtcc atggattttg ttgctggggc 61 cattggagga gtctgcggtg ttgctgtggg ctaccctctg gatacagtga aggtcagaat 121 ccagacggag gccaaatacg caggcatctg gcactgcatc cgggacacgt atcgtcaaga 181 gcgggtgtgg ggcttctaca ggggcctctc actgcccgtg tgcacagtgt ccctggtgtc 241 gtctgtatct tttggtacct accaccactg cctggctcac atctgccgct tccggtacgg 301 cagcacggac gccaagccca ccaaggctga tatcacactc tcaggatgtg cctctggtct 361 tgtccgggtg ttcctgacgt cacccactga ggtggccaaa gtccgcctgc agacacagac 421 ccaagctcag acacagcagc ggcggtcctc ggcctcctgg acatctgggg ctcccgcttt 481 gtgtcccaca cccactgctt gcttggagcc caggcctaag tacagtgggc cactgcactg 541 tttagtcaca gtggctcgag aggaggggct tcggggactc tacaagggca gctcggctct 601 gctccttcgt gagggtcact cctttgccac ctactttctc tcctatgcta tgctctgcga 661 gtggctcacc cctgctggcc atagtcagcc agatgtctta ggtgtgttgg tggctggagg 721 ctgcgctggg gtcctggcct gggccgtggc cacccccatg gatgtgatca agtcacgcct 781 gcaggcggat gggcagggcc agcatcgcta ccggggcctc ctgcactgtg tggtgaccag 841 tgtacgggag gagggtccca gggtgctctt caagggactg gcactcaact gctgtcgtgc 901 ctttcctgtt aacatggtgg tctttgtggc gtatgaggct gtgctgaggc tcacgcagag 961 cctgctcaca taggcaccag tcagcaacat ccacgtcaca cagcagccgg aggcaaaggg 1021 gagaacgggt aggctcagga gcccacgggg ctgtcaccag agcagcagag gaccttctgt 1081 gctgtgactg aggggaggcc tgagctcgga cagcccagct gctgaccaca aaatcaggga 1141 gttgatctgc catctgcttg ggggtcatga gtcaggattg tgtgggtctg cttgatgagg 1201 acatgtgtca cttggagtca ttttcaccga acaaagaact gttcattcct gcttgtactg 1261 ccatgcccat ttcagagcat accttcacca acccctctgg gtgctaggcc aacctcgaaa 1321 cccagttcta ctcagcatcc accgattcac tgtcccttta gagacaggct agggaccaga 1381 cagcaagctg gttacatctg actacaggct gggctggttc cctgtcctag gctactcaga 1441 ggaccgagga atcggtgcag ggcatcacca tcgcataccc acaccacctg taggtgctgt 1501 gctggccaca tgaagatcct ggaacctggg tcaggggtgg ctgttaataa atgtttctgt 1561 ggttgctcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aa //