LOCUS BC067361 2909 bp mRNA linear HUM 16-MAR-2004 DEFINITION Homo sapiens SRY (sex determining region Y)-box 12, mRNA (cDNA clone MGC:71161 IMAGE:6480102), complete cds. ACCESSION BC067361 VERSION BC067361.1 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 2909) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2909) AUTHORS Strausberg,R. TITLE Direct Submission JOURNAL Submitted (15-MAR-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: DCTD/DTP cDNA Library Preparation: Rubin Laboratory cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAL Plate: 50 Row: n Column: 15 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21264338. FEATURES Location/Qualifiers source 1..2909 /db_xref="H-InvDB:HIT000262565" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:71161 IMAGE:6480102" /tissue_type="Prostate, carcinoma" /clone_lib="NIH_MGC_40" /lab_host="DH10B-R" /note="Vector: pOTB7" gene 1..2909 /gene="SOX12" /gene_synonym="SOX22" /db_xref="GeneID:6666" /db_xref="MIM:601947" CDS 261..1208 /gene="SOX12" /gene_synonym="SOX22" /codon_start=1 /product="SOX12 protein" /protein_id="AAH67361.1" /db_xref="GeneID:6666" /db_xref="MIM:601947" /translation="MVQQRGARAKRDGGPPPPGPGPAEEGAREPGWCKTPSGHIKRPM NAFMVWSQHERRKIMDQWPDMHNAEISKRLGRRWQLLQDSEKIPFVREAERLRLKHMA DYPDYKYRPRKKSKGAPAKARPRPPGGSGGGSRLKPGPQLPGRGGRRAAGGPLGGGAA APEDDDEDDDEELLEVRLVETPGRELWRMVPAGRAARGQAERAQGPSGEGAAAAAAAS PTPSEDEEPEEEEEEAAAAEEGEEETVASGEESLGFLSRLPPGPAGLDCSALDRDPDL QPPSGTSHFEFPDYCTPEVTEMIAGDWRPSSIADLVFTY" misc_feature 378..584 /gene="SOX12" /gene_synonym="SOX22" /note="HMG_box; Region: HMG (high mobility group) box" /db_xref="CDD:pfam00505" BASE COUNT 501 a 1029 c 918 g 461 t ORIGIN 1 ttcggcacga ggcgggcggg gagcggcgcg cgcgggccgc ggcggagcca gaggctgcag 61 gaagagcccg cgggggcccg gagggtgcga ttcctcggcc cccgcaaaac aatgtgtgtt 121 gtgagccagg acgcaacttg ccggaggcgg cgggggcgcg ccgagcccgc ctgagaccgc 181 gctgacctcc tcccccaccc ccagccgcgg aggatgcgga cggcccccgg cggcgtctag 241 cggccccggg cccaggcgcg atggtgcagc agcggggcgc gagggccaag cgggacggcg 301 ggccgccgcc cccgggaccc gggccggccg aggagggggc gcgcgagccc ggctggtgca 361 agaccccgag cggccacatc aagaggccga tgaacgcatt catggtgtgg tcgcagcacg 421 aacggcggaa gatcatggac cagtggcccg acatgcacaa cgccgagatc tccaagcgcc 481 tgggccgccg ctggcagctg ctgcaggact cggagaagat cccgttcgtg cgggaggcgg 541 agcggctgcg gctcaagcac atggcggatt acccggacta caagtaccgg ccgcgcaaaa 601 agagcaaggg ggcgcccgcc aaggcgcggc cccgcccccc cggtggtagc ggtggcggca 661 gccggctcaa gcccgggccg cagctgcctg gccgcggggg ccgccgagca gcgggagggc 721 ctttgggggg cggggcggcg gcgcccgagg acgacgatga agacgacgac gaggagctgc 781 tggaagtgcg cctggtcgag accccggggc gggagctgtg gaggatggtc ccggcgggac 841 gggccgctcg gggacaagcg gagcgcgccc aagggccgtc gggcgagggg gcggccgccg 901 ccgccgccgc ctccccgaca ccgtcggagg acgaggagcc ggaggaagag gaggaggagg 961 cggcagcggc tgaggaaggt gaagaggaga cggtggcgtc gggggaggag tcgctgggct 1021 ttctgtccag gctgccccct ggcccggccg gcctggactg cagcgccctg gatcgcgacc 1081 cggacctgca gcctccctcg ggcacgtcgc acttcgagtt cccggactac tgcacccccg 1141 aggttaccga gatgatcgcg ggggactggc gcccgtctag catcgcagac ctggttttca 1201 cctactgagc ccaccgtcag cggggcgcgc acgcccccaa accagctgtt tacatacagg 1261 aatcaggtat tggggcccct cggaggccga ggctggcacc ccatctcccg cgcagcctgc 1321 cccctcctgg acgtgcccat cccccctcag atccagacat gcccctcccc cgcagacaca 1381 ccccaaggca gcccaacccc caccccttcc ccgacaccca agcccctccc cacgtcgccc 1441 cctcctgcac agccaccagc agccagcccc ctccgataca cctcccgtcc tctcctacag 1501 acctgcaccc ctcccccctt ttgcacacgc ccctcctcgt ggccggagga cccgccccct 1561 cctttgctcc ggaatctctc ctccctcgcc cggcccgcct tctctgggtt aggggggcga 1621 tgcggccggg tggcaacgca cgcgcctcct gcgcccctcc cttccctggg gggaggggcg 1681 cacccctttt atccccggag cgctagggcc cgcccctccg ctggggccca cccccttcgt 1741 gcgcatgctt aatgcttctg gggaggaggg ggctggtccc agcggagccg cactcttcgc 1801 ccgctccggg caaaagcggg ggcgagtgta gagcgatcct gggaaatcct ttgatccggg 1861 agccctaggt ttcctctcca gccaacgggg cgtcgctgcc ttaatgggag gagcactcgg 1921 aagggttggt ttgggcctga aactctccca agtggcatag ccccttttcc ggtatggggt 1981 ctcctacacc cacgcgcacc acctctccgg tcgcgtggct gcctctacag cctacctata 2041 cgtccctttt tccccccaac tgggaattga gaggtaaggt ctttctctgg aaatccagca 2101 gtagaggaag ggaccaccca agaaaactaa aaaccaaggc accttaccag tctgtctggg 2161 gacaggatcc ctgctgcacc ttccccaccc cctcctggga agtgccccct cacctcaggg 2221 cacccgcaac ctgggctcct ccctgagcgc accggccctt cctgtcaccc aggtccaccc 2281 tcagtactca agctgcagta tacagcggga aaaactgagg cactttggtg ctaggggttt 2341 gggactgagg cgtggagagc agatgtgatg gcaggaagac tctcgctttt aaacatctgg 2401 tttgggagag accatcgact tggccagtga gactgagaat ggattccgag tagtgatggg 2461 ccgtttgcac ctcggttttt ccacgtgaga aatggggaga acgctgctgt taggaggaag 2521 ttgtgtccag ttcagggtgc cctcgggagc cctgtccctg ttgctgtggc ccctctcacg 2581 ccgccatctc tctgccccgc cccgcccctc cggcctcccc acacccccct tgccctcact 2641 acctgtatct caccggcgtg tgttcaccct cccgggtggc tcacacactc tcattcacac 2701 acacaaatct caggaacaaa cggtcccaga gtcctccgga cccctgccca gggtctctgc 2761 aggtctctgc cccacgcgtt cccgtcgctg acaaagccac cagctgcctc ctttaagctt 2821 ggtgctccgg ctctgggcct ttcttgcgct ctattttttt tttttttttt tttaagaaaa 2881 acaacaacaa caaaaaaaaa aaaaaaaaa //