LOCUS BC065057 2712 bp mRNA linear ROD 02-DEC-2006 DEFINITION Mus musculus UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast), mRNA (cDNA clone MGC:86142 IMAGE:5715800), complete cds. ACCESSION BC065057 VERSION BC065057.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2712) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2712) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: Plate: Row: Column: 0 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31342532. FEATURES Location/Qualifiers source 1..2712 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:86142 IMAGE:5715800" /tissue_type="Mouse, brain 12.5 dpc" /clone_lib="NIH_BMAP_FC0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..2712 /gene="Utp15" /db_xref="GeneID:105372" /db_xref="MGI:MGI:2145443" CDS 201..1787 /gene="Utp15" /codon_start=1 /product="UTP15, U3 small nucleolar ribonucleoprotein, homolog (yeast)" /protein_id="AAH65057.1" /db_xref="GeneID:105372" /db_xref="MGI:MGI:2145443" /translation="MAGYKPVAIQTYPVLGEKITQDTLYWNNYKTPVQIKEFGAVSKV DFSPQLPYNYAVTASSRIHIYGRYSQEPVKTFSRFKDTAYCATFRQDGQLLVAGSEDG VVQLFDINGRAPLRQFEGHTKAVHTVDFTADNYHVVSGADDYTVKLWDIPNSKEILTF KEHSDYVRCGCASKLNPDLFVTGSYDHTVKIFDARTNKNVLCVEHGQPVESVLLFPSG GLLVSAGGRYVKVWDMLKGGQLLVSLKNHHKTVTCLCLSSSGQRLLSGSLDRKVKVYS TTSYKVVHSFDYAASILSLALSHQDETIVVGMTNGILSVKHRKSEAKKTSLPRRRRPA YRTFIKGKNYLKQRDDIMVSRPAKKHLEGYDKDLKSFRVSQALDRVLEPKCVIRTPEV TVSIIKELTRRGVLANALAGRDEKEVTRVLNFLIRNLSQPRFAPVLINAAEIIIDIYL PVIGQSSVVDKKFIVLQELVEKEIDYQRELLETLGMMDMLFATMTRNDSDPVPEHVPA ELPEEKTESPTQPSDTDKNS" BASE COUNT 714 a 595 c 655 g 748 t ORIGIN 1 ggactgtccg cgtgattttg agcgagtgct gcagagcggt atgctgtagg gagctggcga 61 agtctgggga gtcgtcctgg ggatcggtgc ctcggtggac cctcggggcc ccgcggaggc 121 ctgaggcaga gtcactgaag ttattgtgaa attagttcca gactcctgac cctaggataa 181 cagcgcactt atatgaaacc atggccggct ataaacctgt agcgattcaa acatatcctg 241 tacttggtga gaagatcacc caagacactc tgtactggaa caactataag acccctgttc 301 agattaagga atttggtgca gtgtccaaag tagacttttc tcctcagctt ccatataact 361 atgcagtcac agcttcttcg agaatccaca tttatggccg gtactctcaa gagcctgtaa 421 aaaccttttc ccgttttaag gacacagcat attgtgcgac ttttcgacag gatggtcagt 481 tgctcgttgc tggcagtgaa gatggtgtag ttcaactttt tgatataaat gggagggctc 541 ccctcaggca gtttgaaggc cacacaaaag cagttcatac agtagatttt acagctgaca 601 attatcatgt ggtctctgga gctgatgact atactgttaa attatgggat attccaaact 661 ctaaagaaat cctgacattc aaagaacatt ctgattacgt gaggtgcggc tgtgccagca 721 aactgaaccc agaccttttt gtaacaggat catacgatca tactgtgaag atattcgatg 781 ctcggacaaa taagaatgtt ctctgtgtgg agcatgggca gccagtggag agtgtcctgc 841 ttttcccctc aggagggctt ctggtgtctg caggaggccg ctatgttaaa gtctgggaca 901 tgttaaaagg aggacagctg cttgtgtctt tgaaaaatca tcacaagact gtgacatgtt 961 tgtgtctgag cagctctgga cagaggttac tctccggctc actggatagg aaagtgaaag 1021 tctacagcac cacctcctac aaagtcgtcc acagctttga ctacgcagct tcaatcttga 1081 gtctggcact ctctcatcaa gatgagacga tagttgtagg aatgaccaac ggaatactga 1141 gtgttaaaca ccggaagtct gaagcaaaga agacgtctct tccgaggagg aggaggcctg 1201 catatcgaac ctttattaaa ggaaaaaatt acttgaagca acgggatgac atcatggtca 1261 gtaggccagc aaagaagcac ctagaggggt atgacaagga tctgaaaagc tttcgggtct 1321 cacaggccct cgacagagtc ctggagccta aatgtgtgat aaggacccct gaggtgacag 1381 tttccatcat aaaggagctg actcggagag gcgtccttgc caatgctctt gcaggtcggg 1441 acgagaagga ggttacccgg gtccttaact ttttgataag gaatctgtct cagccgaggt 1501 tcgcccctgt tttgattaat gcagctgaga tcatcatcga tatatattta cctgtgattg 1561 gccagtcatc agtagttgat aaaaagttta tagtacttca agaacttgta gaaaaagaaa 1621 ttgattacca aagagaactc ctagagacct tggggatgat ggacatgcta tttgctacca 1681 tgacacggaa tgacagcgac cctgtgccgg agcatgtgcc cgctgaactc ccagaggaga 1741 agacagagtc accaacgcag cccagcgaca cggacaagaa ctcctaactg ggtgttgttt 1801 gactctatta tggagaagaa ggcagcttca gtacactcaa aggataatta agagaagttt 1861 tatggaagag actggattaa ttaaaattgg gacataagta cctgtttcaa gatgtggttt 1921 tccatgtatt gatttatttt atgttgcctt cagctagaag atcttagttg gcttggtcac 1981 agtgtctgtt taccctggat gtgttaattc tgaccttaat ggagccaaaa tctctgttgc 2041 cgtggggcct cgtggccctc tggagaggtt tccaagcgga cagagtcctg ccaagtgaac 2101 agagccccgg ttttgtttcc tgcttctagc ctgggaaata ggaagagcaa acagcaacaa 2161 caaagcatcc atcgctgtcc ccagtgtcct ggggagcttc ctgtcctctc gctggtcact 2221 tcagagtctt gagtcatatg ccttcctcag ctgtttgtgg gactgtcttc caagtgtggc 2281 ggatcactga atattgcccc tggaagtgcg tttagggtgt gatgagtctg ttttgtcacc 2341 taaaaattgt gccctccacc agtgtgttct ttagccttgt gtgtccagag agctctgact 2401 gaaccaattc ccgcccctca gcctgcttcc ttccttccgt cttcaccgtg ctttggttgt 2461 cctctcctct atagtaaagg cctttcagcc tgcccatgtg ctttggcaaa gtgtatcatg 2521 aatatgtaac cctccataac gattctctta tctgtccttc acatttcttt ttctctgtcc 2581 ttcactttct gggtcagact caaacggcag cagtttgctt tgagaattta tgtttctgaa 2641 agttcattgt aaattatatt tttttataaa gagattcttt tcttcttgaa aaaaaaaaaa 2701 aaaaaaaaaa aa //