LOCUS BC064925 2959 bp mRNA linear HUM 13-JAN-2004
DEFINITION Homo sapiens kin of IRRE like 2 (Drosophila), mRNA (cDNA clone
MGC:74484 IMAGE:6141879), complete cds.
ACCESSION BC064925
VERSION BC064925.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2959)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2959)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (02-JAN-2004) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 140 Row: i Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 24475721.
FEATURES Location/Qualifiers
source 1..2959
/db_xref="H-InvDB:HIT000261633"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:74484 IMAGE:6141879"
/tissue_type="Eye, retinoblastoma"
/clone_lib="NIH_MGC_67"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2959
/gene="KIRREL2"
/gene_synonym="DKFZP564A1164"
/gene_synonym="MGC15718"
/gene_synonym="NEPH3"
/gene_synonym="NLG1"
/db_xref="GeneID:84063"
/db_xref="MIM:607762"
CDS 196..2262
/gene="KIRREL2"
/gene_synonym="DKFZP564A1164"
/gene_synonym="MGC15718"
/gene_synonym="NEPH3"
/gene_synonym="NLG1"
/codon_start=1
/product="KIRREL2 protein"
/protein_id="AAH64925.1"
/db_xref="GeneID:84063"
/db_xref="MIM:607762"
/translation="MLRMRVPALLVLLFCFRGRAGPSPHFLQQPEDLVVLLGEEARLP
CALGAYWGLVQWTKSGLALGGQRDLPGWSRYWISGNAANGQHDLHIRPVELEDEASYE
CQATQAGLRSRPAQLHVLVPPEAPQVLGGPSVSLVAGVPANLTCRSRGDARPTPELLW
FRDGVLLDGATFHQTLLKEGTPGSVESTLTLPTGRDTAITLSLQYPPEVTLSASPHTV
QEGEKVIFLCQATAQPPVTGYRWAKGGSPVLGARGPRLEVVADASFLTEPVSCEVSNA
VGSANRSTALDVLFGPILQAKPEPVSVDVGEDASFSCAWRGNPLPRVTWTRRGGAQVL
GSGATLRLPSVGPEDAGDYVCRAEAGLSGLRGGAAEARLTVNAPPVVTALHSAPAFLR
GPARLQCLVFASPAPDAVVWSWDEGFLEAGSQGRFLVETFPAPESRGGLGPGLISVLH
ISGTQESDFSRSFNCSARNRLGEGGAQASLGRRDLLPTVRIVAGVAAATTTLLMVITG
VALCCWRHSKASASFSEQKNLMRIPGSSDGSSSRGPEEEETGSREDRGPIVHTDHSDL
VLEEEGTLETKDPTNGYYKVRGVSVSLSLGEAPGGGLFLPPPSPLGPPGTPTFYDFNP
HLGMVPPCRLYRARAGYLTTPHPRAFTSYIKPTSFGPPDLAPGTPPFPYAAFPTPSHP
RLQTHV"
misc_feature 283..555
/gene="KIRREL2"
/gene_synonym="DKFZP564A1164"
/gene_synonym="MGC15718"
/gene_synonym="NEPH3"
/gene_synonym="NLG1"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
misc_feature 835..1053
/gene="KIRREL2"
/gene_synonym="DKFZP564A1164"
/gene_synonym="MGC15718"
/gene_synonym="NEPH3"
/gene_synonym="NLG1"
/note="IGcam; Region: Immunoglobulin domain cell adhesion
molecule (cam) subfamily"
/db_xref="CDD:cd00931"
misc_feature 1087..1320
/gene="KIRREL2"
/gene_synonym="DKFZP564A1164"
/gene_synonym="MGC15718"
/gene_synonym="NEPH3"
/gene_synonym="NLG1"
/note="IG; Region: Immunoglobulin"
/db_xref="CDD:smart00409"
BASE COUNT 662 a 858 c 876 g 563 t
ORIGIN
1 atgcacttga gtgcaccttg agtctccagc ctctcaagga accgggagat caggccatca
61 gcgtctcagc cagcaaaggc ctgaaccacc agtcccttat aaccctgcgt ttcagagcgt
121 cagaggcgtg cttgagagga agaagttgac gggaaggcca gtgcgacggc aaatctcgtg
181 aaccttgggg gacgaatgct caggatgcgg gtccccgccc tcctcgtcct cctcttctgc
241 ttcagaggga gagcaggccc gtcgccccat ttcctgcaac agccagagga cctggtggtg
301 ctgctggggg aggaagcccg gctgccgtgt gctctgggcg cctactgggg gctagttcag
361 tggactaaga gtgggctggc cctagggggc caaagggacc taccagggtg gtcccggtac
421 tggatatcag ggaatgcagc caatggccag catgacctcc acattaggcc cgtggagcta
481 gaggatgaag catcatatga atgtcaggct acacaagcag gcctccgctc cagaccagcc
541 caactgcacg tgctggtccc cccagaagcc ccccaggtgc tgggcggccc ctctgtgtct
601 ctggttgctg gagttcctgc gaacctgaca tgtcggagcc gtggggatgc ccgccctacc
661 cctgaattgc tgtggttccg agatggggtc ctgttggatg gagccacctt ccatcagacc
721 ctgctgaagg aagggacccc tgggtcagtg gagagcacct taaccctgcc cacaggaaga
781 gacacagcta tcacactgag cctgcagtac cccccagagg tgactctgtc tgcttcgcca
841 cacactgtgc aggagggaga gaaggtcatt ttcctgtgcc aggccacagc ccagcctcct
901 gtcacaggct acaggtgggc aaaagggggc tctccggtgc tcggggcccg cgggccaagg
961 ttagaggtcg tggcagacgc ctcgttcctg actgagcccg tgtcctgcga ggtcagcaac
1021 gccgtgggta gcgccaaccg cagtactgcg ctggatgtgc tgtttgggcc gattctgcag
1081 gcaaagccgg agcccgtgtc cgtggacgtg ggggaagacg cttccttcag ctgcgcctgg
1141 cgcgggaacc cgcttccacg ggtaacctgg acccgccgcg gtggcgcgca ggtgctgggc
1201 tctggagcca cactgcgtct tccgtcggtg gggcccgagg acgcaggcga ctatgtgtgc
1261 agagctgagg ctgggctatc gggcctgcgg ggcggcgccg cggaggctcg gctgactgtg
1321 aacgctcccc cagtagtgac cgccctgcac tctgcgcctg ccttcctgag gggccctgct
1381 cgcctccagt gtctggtttt cgcctctccc gccccagatg ccgtggtctg gtcttgggat
1441 gagggcttcc tggaggcggg gtcgcagggc cggttcctgg tggagacatt ccctgcccca
1501 gagagccgcg ggggactggg tccgggcctg atctctgtgc tacacatttc ggggacccag
1561 gagtctgact ttagcaggag ctttaactgc agtgcccgga accggctggg cgagggaggt
1621 gcccaggcca gcctgggccg tagagacttg ctgcccactg tgcggatagt ggccggagtg
1681 gccgctgcca ccacaactct ccttatggtc atcactgggg tggccctctg ctgctggcgc
1741 cacagcaagg cctcagcctc tttctccgag caaaagaacc tgatgcgaat ccctggcagc
1801 agcgacggct ccagttcacg aggtcctgaa gaagaggaga caggcagccg cgaggaccgg
1861 ggccccattg tgcacactga ccacagtgat ctggttctgg aggaggaagg gactctggag
1921 accaaggacc caaccaacgg ttactacaag gtccgaggag tcagtgtgag cctgagcctt
1981 ggcgaagccc ctggaggagg tctcttcctg ccaccaccct ccccccttgg gcccccaggg
2041 acccctacct tctatgactt caacccacac ctgggcatgg tccccccctg cagactttac
2101 agagccaggg caggctatct caccacaccc caccctcgag ctttcaccag ctacatcaaa
2161 cccacatcct ttgggccccc agatctggcc cccgggactc cccccttccc atatgctgcc
2221 ttccccacac ctagccaccc gcgtctccag actcacgtgt gacatctttc caatggaaga
2281 gtcctgggat ctccaacttg ccataatgga ttgttctgat ttctgaggag ccaggacaag
2341 ttggcgacct tactcctcca aaactgaaca caaggggagg gaaagatcat tacatttgtc
2401 aggagcattt gtatacagtc agctcagcca aaggagatgc cccaagtggg agcaacatgg
2461 ccacccaata tgcccaccta ttccccggtg taaaagagat tcaagatggc aggtaggccc
2521 tttgaggaga gatggggaca gggcagtggg tgttgggagt ttggggccgg gatggaagtt
2581 gtttctagcc actgaaagaa gatatttcaa gatgaccatc tgcattgaga ggaaaggtag
2641 cataggatag atgaagatga agagcatacc aggccccacc ctggctctcc ctgaggggaa
2701 ctttgctcgg ccaatggaaa tgcagccaag atggccatat actccctagg aacccaagat
2761 ggccaccatc ttgattttac tttccttaaa gactcagaaa gacttggacc caaggagtgg
2821 ggatacagtg agaattacca ctgttggggc aaaatattgg gataaaaata tttatgttta
2881 ataataaaaa aaagtcaaag aggaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2941 aaaaaaaaaa aaaaaaaaa
//