LOCUS BC064634 2214 bp mRNA linear HUM 19-MAR-2009
DEFINITION Homo sapiens alcohol dehydrogenase, iron containing, 1, mRNA (cDNA
clone MGC:70541 IMAGE:5748980), complete cds.
ACCESSION BC064634
VERSION BC064634.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2214)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2214)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (22-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 139 Row: l Column: 10
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 21389518
The stop codon of the CDS annotated on this record is located > 55
bases upstream of a splice junction, and therefore the mRNA is
predicted to be subject to nonsense-mediated mRNA decay (NMD).
FEATURES Location/Qualifiers
source 1..2214
/db_xref="H-InvDB:HIT000261553"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:70541 IMAGE:5748980"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2214
/gene="ADHFE1"
/gene_synonym="ADH8"
/gene_synonym="HMFT2263"
/gene_synonym="HOT"
/db_xref="GeneID:137872"
/db_xref="HGNC:HGNC:16354"
/db_xref="MIM:611083"
CDS 114..881
/gene="ADHFE1"
/gene_synonym="ADH8"
/gene_synonym="HMFT2263"
/gene_synonym="HOT"
/codon_start=1
/product="ADHFE1 protein"
/protein_id="AAH64634.1"
/db_xref="GeneID:137872"
/db_xref="HGNC:HGNC:16354"
/db_xref="MIM:611083"
/translation="MAVSNIRYGAAVTKEVGMDLKNMGAKNVCLMTDKNLSKLPPVQV
AMDSLVKNGIPFTVYDNVRVEPTDSSFMEAIEFAQKGAFDAYVAVGGGSTMDTCKAAN
LYASSPHSDFLDYVSAPIGKGKPVSVPLKPLIAVPTTSGTGSETTGVAIFDYEHLKVK
IGITSRAIKPTLGLIDPLHTLHMPARVVANSGFDVLCHALESYTTLPYHLRSPCPSNP
ITRPAYQGSNPISDIWAIHALRIVAKYLKRAVNSTDK"
BASE COUNT 592 a 544 c 497 g 581 t
ORIGIN
1 gaggactcca agcgccatgg ccgctgccgc ccgagcccgg gtcgcgtact tgctgaggca
61 actgcaacgc gcagcgtgcc agtgcccaac tcattctcat acttactccc aagatggctg
121 tttcaaatat tagatatgga gcagcagtta caaaggaagt aggaatggac ctaaaaaaca
181 tgggtgctaa aaatgtgtgc ttgatgacag acaagaacct ctccaagctc cctcctgtgc
241 aagtagctat ggattcccta gtgaagaatg gcatcccctt tacggtttat gataatgtga
301 gagtggaacc aacggattca agcttcatgg aagctattga gtttgcccaa aagggagctt
361 ttgatgccta tgttgctgtc ggtggtggct ctaccatgga cacctgtaag gctgctaatc
421 tgtatgcatc cagccctcat tctgatttcc tagattatgt cagtgccccc attggcaagg
481 gaaagcctgt gtctgtgcct cttaagcctc tgattgcagt gccaactacc tcaggaaccg
541 ggagtgaaac tactggggtt gccatttttg actatgaaca cttgaaagta aaaattggca
601 tcacttcgag agccatcaaa cccacactgg gactgattga tcctctgcac accctccaca
661 tgcctgcccg agtggtcgcc aacagtggct ttgatgtgct ttgccatgcc ctggagtcat
721 acaccaccct gccctaccac ctgcggagcc cctgcccttc aaatcccatc acacggcctg
781 cgtaccaggg cagcaaccca atcagtgaca tttgggctat ccacgcgctg cggatcgtgg
841 ctaagtatct gaagagggcc gtcaacagca ctgacaaatg aagaagaaga atgagtctca
901 gggcaccttc ctggagtggc cctcgccatc cagggaccag cgcgttgcct cccccggcgc
961 ttttacatca catgagcagc tgacagcgta tttattatgc ctttgctgaa acagttgatg
1021 agaaatatgt ttcccttcag ttttcattta gaagacaagg cgtcgtttga ataacttgcc
1081 tgatttttct tcctaccgag tagcatttct ttttttttca ccatatcttt ccctaaggca
1141 gctccttatt ctgtaggaat tgccaatgtt gatgtgttat tgttaggtat ttatatcatt
1201 cacagggctg tcagaaatcc cgatgatctt gaagcaaggt ctcatatgca cttggcaagt
1261 gcttttgctg gcatcggctt tggaaatgct ggtgttcatc tgtgccatgg aatgtcttac
1321 ccaatttcag gtttagtgaa gatgtataaa gcaaaggatt acaatgtgga tcacccactg
1381 gtgccccatg gcctttctgt ggtgctcacg tccccagcgg tgttcacttt cacggcccag
1441 atgtttccag agcgacacct ggagatggca gaaatactgg gagccgacac ccgcactgcc
1501 aggatccaag atgcagggct ggtgttggca gacacgctcc ggaaattctt attcgatctg
1561 gatgttgatg atggcctagc agctgttggt tactccaaag ctgatatccc cgcactagtg
1621 aaaggaacgc tgccccagga aagggtcacc aagcttgcac cccgtcccca gtcagaagag
1681 gatctggctg ctctgtttga agcttcaatg aaactgtatt aattgtcatt ttaactgaaa
1741 gaattaccgc tggccattgt agtgctgaga gcaagagctg atctagctag ggctttgtct
1801 tttcatcttt gtgcataact tacctgttac cagtataggt gggatataca tttatcttgc
1861 aggaaattcc ccaaagctca gagtccagtt ccttccataa aacaggctgg acaaatgacc
1921 actatgttag acccccaggc tcgacttcag gggtcagtgt tcctgtccca aaccccacac
1981 agaatactct gcctctgctt catgtagcaa atgagcaaaa actcagtatc tatcaaaagt
2041 gtaaattata tttcctatgc ctagtaattc acttcatgtc taaaaattta tctgatagaa
2101 acactagcac cagtacatac agaagcatgg caaggatgtt tctggcagca cttttctaat
2161 aataaaagat ttgaaacaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//