LOCUS BC064067 2316 bp mRNA linear ROD 15-JUL-2006
DEFINITION Mus musculus Smad nuclear interacting protein 1, mRNA (cDNA clone
MGC:73648 IMAGE:949686), complete cds.
ACCESSION BC064067
VERSION BC064067.1
KEYWORDS MGC.
SOURCE Mus musculus (house mouse)
ORGANISM Mus musculus
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha;
Muroidea; Muridae; Murinae; Mus; Mus.
REFERENCE 1 (bases 1 to 2316)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2316)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (11-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Marcello Bento Soares, Ph.D.
cDNA Library Preparation: M. Bento Soares, University of Iowa
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson
Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen
Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel
Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave
Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR
Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang,
Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 138 Row: e Column: 21
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31340721.
FEATURES Location/Qualifiers
source 1..2316
/organism="Mus musculus"
/mol_type="mRNA"
/strain="C57BL/6J"
/db_xref="taxon:10090"
/clone="MGC:73648 IMAGE:949686"
/tissue_type="Mammary gland"
/clone_lib="Soares_mammary_gland_NbMMG"
/lab_host="DH10B"
/note="Vector: pT7T3-Pac"
gene 1..2316
/gene="Snip1"
/db_xref="GeneID:76793"
/db_xref="MGI:MGI:2156003"
CDS 34..1185
/gene="Snip1"
/codon_start=1
/product="Smad nuclear interacting protein 1"
/protein_id="AAH64067.1"
/db_xref="GeneID:76793"
/db_xref="MGI:MGI:2156003"
/translation="MKAGKSERERSGRRRHRSGDALTTVVVKQERLSPEPVAHRRPDA
PAASLSPPAAEPGHSGHRGSRARSPAKKKSKSSGRRSKSPRTKRSQSPHYPMVKVKQE
REDHPRRGREDRQHREPSEQEHRRARNSERDRHRGHSRQGRSSDERPVSGQDRDRDSQ
NLQAQEEERDFHNARRREHRQQNESAGSEAQEVIPRPAGNRSKEVPVKEKPSFELSGA
LLEDTNTFRGVVIKYSEPPEARIPKKRWRLYPFKNDEVLPVMYIHRQSAYLLGRHRRI
ADIPIDHPSCSKQHAVFQYRLVEYTRADGTVGRRVKPYIIDLGSGNGTFLNNKRIEPQ
RYYELKEKDVLKFGFSSREYVLLHESSDTSELDRKEDEDDEEEEMVSDS"
BASE COUNT 590 a 556 c 619 g 551 t
ORIGIN
1 gaccgtgcaa gtgactctcg gtcgggccgc aggatgaagg cggggaaaag cgagcgggag
61 cggagcggcc ggcggcgaca ccggtcaggc gacgctctga cgaccgtggt ggtgaaacag
121 gagcgtctga gccccgaacc cgtcgcgcac cgccggcccg acgctccagc cgctagcctg
181 tccccgcccg ccgccgagcc tggccactcg ggtcaccgcg ggagccgagc ccggtcccca
241 gccaagaaga aaagcaagtc ctctgggaga agaagcaagt caccacggac caagagaagc
301 cagagtcccc actaccccat ggtcaaagtg aagcaggaac gtgaggacca tcctcggaga
361 ggacgagagg atcggcagca ccgggaacca tcagaacagg agcacaggag agctcggaac
421 agtgagcgag accggcaccg gggccattcc cgccaaggga ggagctctga tgagaggccc
481 gtcagtggac aggatcggga tagagacagc cagaacctgc aggcccagga agaagagagg
541 gactttcata atgccaggcg ccgggagcac cgccagcaga atgaaagtgc tggcagtgag
601 gctcaggagg tgatccctcg tcctgctggg aacagaagca aagaggtgcc cgttaaagag
661 aaaccaagct ttgaactttc tggggcactt cttgaggaca ccaatacctt ccggggtgtg
721 gttattaaat acagtgagcc cccagaagcc cggatcccca aaaaacggtg gcgcctctac
781 ccctttaaaa atgatgaggt acttccagtc atgtacatcc atcggcagag tgcatacctt
841 ctgggtagac atcgacgcat cgcagacatt cccatcgacc atccctcttg ctcaaagcaa
901 catgcagtct tccagtaccg gcttgtggag tacacccgtg ctgacggcac ggttggtcgg
961 agggtgaagc cctacattat cgaccttggc tcaggcaatg gaacattctt gaacaacaag
1021 cgtattgagc cacagagata ttatgaactg aaagaaaaag acgtacttaa atttgggttc
1081 agtagcagag aatatgtctt gcttcatgag tcttcagaca cctctgaact tgacaggaag
1141 gaagatgaag atgatgagga ggaagaaatg gtatctgaca gctagcagct gagaggcagc
1201 ctctactgtt agaaaccgtc cctaccggag gctgtggtgg tcactccagc gcctcttctt
1261 gccttaagtc ttttctctgt tgctgcccag cctatgttgc agtatgagaa ctgtcacttc
1321 atgttttctt gaagttggca cagcagctgc ctgcttgtgg gcccttgttt tctgaacagt
1381 ctcaccaatt acagcatgtc gagtctggtc agagcgtgtg gtgggcacct tcagaactgc
1441 tgcatagcaa actgcccttg gaaaggggat ggtggcttct tctctttgta cagtttccta
1501 tttatatagc tgttgagctt tgtggaccag gagttttgtt ttggggacaa atcctagagt
1561 agagaatctt agtcagcttt ggttgtcacc aaaacagcct ccagcctata ccaaagcttt
1621 gacctgattc agctcttgag tcatagaagt tgattttgca cttcgttttg ggggtgacag
1681 tttaccacgt gacttctcta ttggctgtct tcgataaaca gacactctgt gcgatgtctg
1741 tgtgacaaga ctgtagggag gtcgtggctt ctaccaacag gagctgctgt catactgtgc
1801 actggtctgt agatctgcac cctgaggatt cctgatttct tcatgaagca gacatcatag
1861 tttgatcatc tggtcttttt ctttagcttt gaatttttat tcaaatgtcg cctctcttct
1921 ccctttgaga aacaccacac tgactttgta ggaggggcct tgctgtggcc tagggatgtg
1981 tgtatgtgtc taaacgaggt tgtgtagctt ccacacttcc agttcatctt tgaccatgtg
2041 ttcatatttt cctcccacgg gtggaaagta agagacagcc gagtgtctga acttcccacc
2101 tgggatctgt gagtagaaag atactcctta ctgacagtct gtgtgcttca gagctatgtg
2161 ctgggtttca tatgtcagtg ttttgcgata taaataatac cacatgatag gcaaaggcct
2221 gtctgcattt ggagagcagg ttttcattta tatgtatttt tgagattaaa aaaataaaat
2281 ttgtaaatat aaaaaaaaaa aaaaaaaaaa aaaaaa
//