LOCUS BC063652 1838 bp mRNA linear HUM 18-MAR-2009
DEFINITION Homo sapiens potassium channel tetramerisation domain containing 1,
mRNA (cDNA clone IMAGE:4802987), complete cds.
ACCESSION BC063652
VERSION BC063652.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1838)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1838)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-DEC-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: James Cleaver, M.D.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 134 Row: n Column: 15
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 40217616
This clone has the following problem: The cds is short compared to
the longest cds in the locus.
FEATURES Location/Qualifiers
source 1..1838
/db_xref="H-InvDB:HIT000261106"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:4802987"
/tissue_type="Skin, normal"
/clone_lib="NCI_CGAP_Skn3"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6.1"
gene 1..1838
/gene="KCTD1"
/db_xref="GeneID:284252"
/db_xref="HGNC:HGNC:18249"
CDS 282..1055
/gene="KCTD1"
/codon_start=1
/product="KCTD1 protein"
/protein_id="AAH63652.1"
/db_xref="GeneID:284252"
/db_xref="HGNC:HGNC:18249"
/translation="MSRPLITRSPASPLNNQGIPTPAQLTKSNAPVHIDVGGHMYTSS
LATLTKYPESRIGRLFDGTEPIVLDSLKQHYFIDRDGQMFRYILNFLRTSKLLIPDDF
KDYTLLYEEAKYFQLQPMLLEMERWKQDRETGRFSRPCECLVVRVAPDLGERITLSGD
KSLIEEVFPEIGDVMCNSVNAGWNHDSTHVIRFPLNGYCHLNSVQVLERLQQRGFEIV
GSCGGGVDSSQFSEYVLRRELRRTPRVPSVIRIKQEPLD"
BASE COUNT 532 a 466 c 397 g 443 t
ORIGIN
1 cggggcctcg ccgtgcctcc tccaccctgc tcattaacct gcctgctccg ctccgctccg
61 ggcggcccca gacacgggtt tcccgcggca gcacccgcgg cccgcccggc gcagccgccg
121 ccccgacccc ccggctccgg ggggcaatga gggggcagtg gaaggggcac tgctcctcgg
181 gcattactta gagaaacgag accgtcccgc cctctcgccg gccctccctc tctcccgccc
241 gggcccgcgc aattctccgc cagagggaca gtcggcccaa tatgtcaaga cctctgatca
301 ctagatcccc tgcatctcca ctgaacaacc aaggcatccc tactccagca caactcacaa
361 aatccaatgc acctgtccac attgatgtgg gcggccacat gtacaccagc agcctggcca
421 ccctcaccaa ataccctgaa tccagaatcg gaagactttt tgatggtaca gagcccattg
481 ttttggacag tctcaaacag cactatttca ttgacagaga tggacagatg ttcagatata
541 tcttgaattt tctacgaaca tccaaactcc tcattcctga tgatttcaag gactacactt
601 tgttatatga agaggcaaaa tattttcagc ttcagcccat gttgttggag atggaaagat
661 ggaagcagga cagagaaact ggtcgatttt caaggccctg tgagtgcctc gtcgtgcgtg
721 tggccccaga cctcggagaa aggatcacgc taagcggtga caaatccttg atagaagaag
781 tatttccaga gatcggcgac gtgatgtgta actctgtcaa tgcaggctgg aatcacgact
841 cgacgcacgt catcaggttt ccactaaatg gctactgtca cctcaactca gtccaggtcc
901 tcgagaggtt gcagcaaaga ggatttgaaa tcgtgggctc ctgtggggga ggagtagact
961 cgtcccagtt cagcgaatac gtccttcggc gggaactgag gcggacgccc cgtgtaccct
1021 ccgtcatccg gataaagcaa gagcctctgg actaaatgga catatttctt atgcaaaaag
1081 gaaaacacac acaaccaata actcaaacaa aaaagggaca tttatgtgca gttgggacag
1141 caaaccaagt cctggacgta aaatcgaata aaagacacat ttatatccaa tagagaccac
1201 acctgtattc atatgggaac aattggaata gtgatatcct caaggtgtaa aaaatatata
1261 aatatatata tatatgtcaa aaggtaggaa atgcaaaaaa gaaaaaaaaa aaaggtgaca
1321 gccgcagttg gtgctgtgat ggccgtgaag tgtcctgggc ctcccgaggc ctctgacaaa
1381 taaacaagcc atgagtggtg aggacacagt ctccttacag tttccattgc caacaacagc
1441 catccatatt tcttttttcc tttgtctttc tttttccttt ttttttaaaa aaacaaaaca
1501 aacaaaacac cttgaatcaa gtttgtttgt atatggaggt tccacgtctt tctttaggca
1561 gggaccaggc aggacttcag aaaaaccctc atgagcacat tgcaaagatg ttagacatga
1621 aattttaaat gtagtttgta cagaagtcac acttttttgt ccacctcaca gatgtgaact
1681 ttactttgtt ttaaaactga tcagttttgc caaggggcca gaattattcc ttgttagaat
1741 tgctccagtt caagtctgct gctttcctac aatttttcaa attttataat gtattaaata
1801 caataaactc tgtttaaaaa ataaaaaaaa aaaaaaaa
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