LOCUS BC056643 1230 bp mRNA linear ROD 04-AUG-2006 DEFINITION Mus musculus aldo-keto reductase family 1, member C6, mRNA (cDNA clone MGC:67956 IMAGE:5098276), complete cds. ACCESSION BC056643 VERSION BC056643.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1230) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1230) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (25-AUG-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Jeffrey E. Green, M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 123 Row: g Column: 21 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13487924. FEATURES Location/Qualifiers source 1..1230 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:67956 IMAGE:5098276" /tissue_type="Liver, normal. 5 month old male mouse." /clone_lib="NCI_CGAP_Li9" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1230 /gene="Akr1c6" /gene_synonym="3alpha-HSD" /db_xref="GeneID:83702" /db_xref="MGI:MGI:1933427" CDS 31..1002 /gene="Akr1c6" /gene_synonym="3alpha-HSD" /codon_start=1 /product="aldo-keto reductase family 1, member C6" /protein_id="AAH56643.1" /db_xref="GeneID:83702" /db_xref="MGI:MGI:1933427" /translation="MDSKQQTVRLSDGHFIPILGFGTYAPQEVPKSKATEATKIAIDA GFRHIDSASMYQNEKEVGLAIRSKIADGTVKREDIFYTSKVWCTFHRPELVRVCLEQS LKQLQLDYVDLYLIHFPMAMKPGENYLPKDENGKLIYDAVDICDTWEAMEKCKDAGLA KSIGVSNFNRRQLEKILKKPGLKYKPVCNQVECHPYLNQGKLLDFCRSKDIVLVAYSA LGSHREKQWVDQSSPVLLDNPVLGSMAKKYNRTPALIALRYQLQRGVVVLAKSFSEKR IKENMQVFEFQLTSEDMKVLDDLNKNIRYISGSSFKDHPDFPFWDEY" BASE COUNT 373 a 241 c 279 g 337 t ORIGIN 1 gtatcttctc agttggtggg ctgagaagcc atggattcta agcagcagac agtgcgtcta 61 agtgatggtc acttcatccc tatactgggg tttggtacct atgcacctca agaggtacct 121 aagagtaagg ctacagaagc tactaaaata gccatagatg ctggtttccg ccatattgat 181 tctgcttcta tgtatcaaaa tgaaaaggaa gtaggactag ccatccgaag caagatagca 241 gatggcactg tgaagaggga agatatattt tacacatcaa aggtttggtg tacttttcat 301 cgtccagaac tcgtacgggt ctgcttggaa cagtcattga agcaactcca gttggactat 361 gtggacctgt acctcattca tttcccaatg gccatgaagc cgggagaaaa ttatctccca 421 aaagatgaaa atggaaaatt aatatatgat gctgtggata tctgtgacac ctgggaagcc 481 atggagaaat gcaaggatgc aggattggcc aagtccattg gggtgtccaa ctttaaccgc 541 aggcagctgg agaagatcct gaaaaagccg gggctcaagt acaagcctgt gtgcaaccag 601 gtagaatgtc atccttatct caatcaggga aaacttctgg atttctgcag gtcaaaagac 661 attgttctgg ttgcttacag tgctctggga agccatcgtg aaaaacaatg ggttgatcag 721 agctctcctg ttcttttgga taatccagtt cttggctcaa tggcaaaaaa gtacaatcga 781 actcctgcgc tgattgccct tcgctaccag ctacaacgtg gggttgtggt cctcgccaag 841 agtttctctg agaagaggat aaaagagaat atgcaggttt ttgaatttca gttgacttca 901 gaggacatga aagtcctcga tgacctgaat aaaaatatcc gatacataag tggttctagc 961 tttaaggacc atcctgattt tccattttgg gatgaatact aactggaggt ccattttgtg 1021 ccttgtgcca gatgtcactg cattggaaga gtgtatagga agagtattct caaaatgtga 1081 tgattacata tcaccctaat ccaagcttct gagcaattct ggctctgctg aatctaccat 1141 tttaaccaag aaagccaaaa ctatgtatat ttctcctttc taagaaataa aagaatcgtt 1201 attctttagc atttaaaaaa aaaaaaaaaa //