LOCUS BC055286 2352 bp mRNA linear HUM 04-AUG-2008
DEFINITION Homo sapiens alpha 1,4-galactosyltransferase, mRNA (cDNA clone
MGC:61705 IMAGE:6161307), complete cds.
ACCESSION BC055286
VERSION BC055286.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2352)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2352)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (21-JUL-2003) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 115 Row: m Column: 9
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 55956926.
FEATURES Location/Qualifiers
source 1..2352
/db_xref="H-InvDB:HIT000054113"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:61705 IMAGE:6161307"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2352
/gene="A4GALT"
/gene_synonym="A14GALT"
/gene_synonym="A4GALT1"
/gene_synonym="P1"
/gene_synonym="PK"
/db_xref="GeneID:53947"
/db_xref="HGNC:HGNC:18149"
/db_xref="MIM:607922"
CDS 491..1552
/gene="A4GALT"
/gene_synonym="A14GALT"
/gene_synonym="A4GALT1"
/gene_synonym="P1"
/gene_synonym="PK"
/codon_start=1
/product="A4GALT protein"
/protein_id="AAH55286.1"
/db_xref="GeneID:53947"
/db_xref="HGNC:HGNC:18149"
/db_xref="MIM:607922"
/translation="MSKPPDLLLRLLRGAPRQRVCTLFIIGFKFTFFVSIVIYWHVVG
EPKEKGQLYNLPAEIPCPTLTPPTPPSHGPTPGNIFFLETSDRTNPNFLFMCSVESAA
RTHPESHVLVLMKGLPGGNASLPRHLGISLLSCFPNVQMLPLDLRELFRDTPLADWYA
AVQGRWEPYLLPVLSDASRIALMWKFGGIYLDTDFIVLKNLRNLTNVLGTQSRYVLNG
AFLAFERRHEFMALCMRDFVDHYNGWIWGHQGPQLLTRVFKKWCSIRSLAESRACRGV
TTLPPEAFYPIPWQDWKKYFEDINPEELPRLLSATYAVHVWNKKSQGTRFEATSRALL
AQLHARYCPTTHEAMKMYL"
BASE COUNT 477 a 715 c 718 g 442 t
ORIGIN
1 tgcacttctg tgcctcaatt tcctcatctg tagggtgggg gtggtgattg ccaccccata
61 gggtggttat aaggggccac acatgttcct atgtgtgaga tgctgagaaa gtcacctggc
121 atggacagga tggacagcca gtatttatcg aactatgaat gaatgaatgt taccctttag
181 tgggttccag cgtcctatcc tgtcggtggg aagactgagg ctcagagagc tccgtaactt
241 gccccaggtc acacagccgg ttcaggcaga gttggggtct catgcctccc aggtgttccc
301 acagtctttt ccccaggagc agggtccaag cctgctgctc ctccaaccac ctgcgaggca
361 cctgggcatg ttcctggcca ccaggaaaga gaggtctaat ggcagtagta ccagtcagcg
421 tcatgtgcct ggagcgagtg ccctaccagc cggttcctgc tggaagctcc tggtctgatc
481 tggggatacc atgtccaagc cccccgacct cctgctgcgg ctgctccggg gcgccccaag
541 gcagcgggtc tgcaccctgt tcatcatcgg cttcaagttc acgtttttcg tctccatcgt
601 gatctactgg cacgttgtgg gagagcccaa ggagaaaggg cagctctata acctgccagc
661 agagatcccc tgccccacct tgacaccccc caccccaccc tcccacggcc ccactccagg
721 caacatcttc ttcctggaga cttcagaccg gaccaacccc aacttcctgt tcatgtgctc
781 ggtggagtcg gccgccagaa ctcaccccga atcccacgtg ctggtcctga tgaaagggct
841 tccgggtggc aacgcctctc tgccccggca cctgggcatc tcacttctga gctgcttccc
901 gaatgtccag atgctcccgc tggacctgcg ggagctgttc cgggacacac ccctggccga
961 ctggtacgcg gccgtgcagg ggcgctggga gccctacctg ctgcccgtgc tctccgacgc
1021 ctccaggatc gcactcatgt ggaagttcgg cggcatctac ctggacacgg acttcattgt
1081 tctcaagaac ctgcggaacc tgaccaacgt gctgggcacc cagtcccgct acgtcctcaa
1141 cggcgcgttc ctggccttcg agcgccggca cgagttcatg gcgctgtgca tgcgggactt
1201 cgtggaccac tacaacggct ggatctgggg tcaccagggc ccgcagctgc tcacgcgggt
1261 cttcaagaag tggtgttcca tccgcagcct ggccgagagc cgcgcctgcc gcggcgtcac
1321 caccctgccc cctgaggcct tctaccccat cccctggcag gactggaaga agtactttga
1381 ggacatcaac ccggaggagc tgccgcggct gctcagtgcc acctatgctg tccacgtgtg
1441 gaacaagaag agccagggca cgcggttcga ggccacatcc agggcactgc tggcccagct
1501 gcatgcccgc tactgcccca cgacgcacga ggccatgaaa atgtacttgt gaggggcccg
1561 ccaggtcacc tccccaacct gctcctgatg gggcactggg ccgcccttcc cggggaggca
1621 agattgaggg cccgggagag ggaggcccga gctgccaccg ggcttaggca ggctgttgag
1681 gagctgtggg agcaggccca gtgggaggct gtggacaccc cgaggacagt gtcctgtctc
1741 gaggcagggc tgacacatgg tgccatagcc agcggagggc gctcagtgag tgccccgggc
1801 cttctagaca acaggcagga aggatgaacc tcagggcacc cccaggtggt gcggaaagcc
1861 aggcagttgg gacagaggtg cccacgaggg cagaggccgg tgctaagggg atggggaaga
1921 agggacaaga ttcccagaga ggagaggagg ctgttggtag gaaagtggca gggctggggg
1981 agacccagcc ccaagggtcc ggggcggagg atgctttgtt cttttctggt tttggttcct
2041 ctttcgcggg gggtggggga ggtcaacagg gactgagtgg ggcagaggcc cagaagtgcc
2101 agcctgggga gccgtttggg ggcagcccct tctgcccacc ccatccttct tcctctccag
2161 agatgccagg ggggcgtgta tgctctaccc cttccctcag acaggggctg ggtggggagg
2221 ctctttaggc tcaggagaag cattttaaag aaacccccac cctgccgccc gcattataaa
2281 cacaggagaa taatcaatag aataaaagtg accgactgtc aaaaaaaaaa aaaaaaaaaa
2341 aaaaaaaaaa aa
//