LOCUS BC054773 1949 bp mRNA linear ROD 15-JUL-2008 DEFINITION Mus musculus chaperonin containing Tcp1, subunit 4 (delta), mRNA (cDNA clone MGC:65609 IMAGE:6807250), complete cds. ACCESSION BC054773 VERSION BC054773.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1949) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1949) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (01-JUL-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAV Plate: 129 Row: c Column: 7. FEATURES Location/Qualifiers source 1..1949 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:65609 IMAGE:6807250" /tissue_type="Brain, pool of enriched mouse brain tissues from 13.5,14.5,16.5 and 17.5 dpc" /clone_lib="NIH_BMAP_FR0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..1949 /gene="Cct4" /gene_synonym="A45" /gene_synonym="Cctd" /db_xref="GeneID:12464" /db_xref="MGI:MGI:104689" CDS 122..1741 /gene="Cct4" /gene_synonym="A45" /gene_synonym="Cctd" /codon_start=1 /product="chaperonin containing Tcp1, subunit 4 (delta)" /protein_id="AAH54773.1" /db_xref="GeneID:12464" /db_xref="MGI:MGI:104689" /translation="MPENVASRSGAPTAGPGSRGKSAYQDRDKPAQIRFSNISAAKAV ADAIRTSLGPKGMDKMIQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEA GDGTTSVVIIAGSLLDSCTKLLQKGIHPTIISESFQKALEKGLEILTDMSRPVQLSDR ETLLNSATTSLNSKVVSQYSSLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTI DDCELVEGLVLTQKVANSGITRVEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVL REERAYILNLVKQIKKTGCNVLLIQKSILRDALSDLALHFLNKMKIMVVKDVEREDIE FICKTIGTKPVAHIDQFTADMLGSAELAEEVSLNGSGKLFKITGCTSPGKTVTIVVRG SNKLVIEEAERSIHDALCVIRCLVKKRALIAGGGAPEIELALRLTEYSRTLSGMESYC VRAFADAMEVIPSTLAENAGLNPISTVTELRNRHAQGEKTTGINVRKGGISNILEEMV VQPLLVSVSALTLATETVRSILKIDDVVNTR" BASE COUNT 584 a 405 c 466 g 494 t ORIGIN 1 cccggcgtcg ctttctggaa ggttcgtgga ggaggcggtc agggagaccg ttactccaca 61 gcaagccgga atccgtgtcc atccgtcctc ctgaacccgc gcagacgcca ccaaggtcgc 121 catgccggag aacgtagctt cccgaagcgg ggcgcccacc gccgggcccg gcagccgcgg 181 gaaaagcgcc taccaggacc gcgacaagcc agcccagatc cgcttcagca atatttccgc 241 agccaaagcg gttgctgatg ctattagaac aagccttgga cctaaaggaa tggacaaaat 301 gattcaagat ggaaaaggcg atgtgaccat tacaaatgat ggtgccacca ttctgaaaca 361 aatgcaggta ttgcatccag cagccagaat gctggtggaa ttgtctaaag ctcaagacat 421 agaagcagga gatggcacca cgtcggttgt catcattgct ggctctcttt tagactcctg 481 taccaaactt ctgcagaaag gtatacatcc aaccatcatt tccgagtcat tccagaaagc 541 tttggaaaag ggtcttgaaa tccttactga catgtctcga cctgtgcaac tgagcgacag 601 agaaactttg ttaaatagcg caactacttc attgaattca aaggttgtct ctcagtattc 661 aagtctactc tctccaatga gtgtcaatgc ggtgatgaaa gtgattgacc cagccacagc 721 taccagtgta gatcttcgag atattaaaat agttaagaag cttggtggga caatagatga 781 ctgtgagctg gtggaaggcc tcgttctcac acagaaagta gcaaattctg gcataacaag 841 agttgaaaag gctaagattg ggcttattca gttttgctta tctgctccta aaacagatat 901 ggataatcaa atagtagtat ctgactatgc ccagatggat cgagtgcttc gagaggagag 961 agcctatatt ttaaatttgg tgaagcaaat taagaaaaca ggatgtaatg tccttctcat 1021 acagaagtct atcctgagag atgcccttag tgatcttgca ttacattttc tgaataagat 1081 gaagattatg gtggttaagg acgttgaaag agaagacatt gaattcatct gtaagacaat 1141 tggaaccaaa ccagttgctc acattgacca gttcactgct gacatgctgg gttctgctga 1201 gttagcagag gaagtcagtt taaatggttc tggaaaacta ttcaagatta caggttgtac 1261 aagcccaggg aaaacagtta caattgtcgt acgtggttct aacaaactgg tgattgaaga 1321 agctgagcgc tccattcatg atgctctctg tgtcatccga tgcttagtaa agaaaagagc 1381 tcttattgca ggaggtggtg ctccagaaat agagctggcc ctcagactga cagagtactc 1441 ccgaacactg agtggtatgg agtcctactg tgttcgtgct ttcgcggatg ctatggaagt 1501 cattccatct acactagctg aaaatgctgg cctgaatccc atttctacag taacagagct 1561 aagaaaccgc catgcccaag gagaaaaaac tacaggcatt aatgtccgaa agggtgggat 1621 ctccaacatt ttggaggaaa tggttgttca gcctctgttg gtgtcagtca gtgctttgac 1681 cttagcaact gaaactgtgc ggagcattct gaaaatcgat gatgtggtaa atactcgata 1741 atctggataa aaggatggtt gactgcatca ttatggacag aagtactgtg gctggaatga 1801 aggacaacca ccttgttcct tgtctggaag cttcagagtt tttggacatt gtcttccagt 1861 tggcatttgt ttgaaattgt attgaaacaa tttaatgaaa acattaaata cttggtttta 1921 aactccaaaa aaaaaaaaaa aaaaaaaaa //