LOCUS BC053146 1968 bp mRNA linear VRT 09-JUN-2008 DEFINITION Danio rerio glutamate-ammonia ligase (glutamine synthase) a, mRNA (cDNA clone MGC:63917 IMAGE:6790669), complete cds. ACCESSION BC053146 VERSION BC053146.1 KEYWORDS MGC. SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 1968) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1968) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-JUN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Leonard I. Zon, M.D. cDNA Library Preparation: Invitrogen Corp cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 117 Row: d Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31419180. FEATURES Location/Qualifiers source 1..1968 /organism="Danio rerio" /mol_type="mRNA" /db_xref="taxon:7955" /clone="MGC:63917 IMAGE:6790669" /tissue_type="Kidney, zebrafish" /clone_lib="NCI_CGAP_ZKid1" /lab_host="DH10B" /note="Vector: pCMV-SPORT6.1" gene 1..1968 /gene="glula" /gene_synonym="cb195" /gene_synonym="cb757" /gene_synonym="etID49849.2" /gene_synonym="fb39g09" /gene_synonym="fd19d09" /gene_synonym="gso1" /gene_synonym="sb:cb195" /gene_synonym="wu:fb39g09" /gene_synonym="wu:fd19d09" /db_xref="GeneID:100000775" /db_xref="ZFIN:ZDB-GENE-030131-688" CDS 102..1217 /gene="glula" /gene_synonym="cb195" /gene_synonym="cb757" /gene_synonym="etID49849.2" /gene_synonym="fb39g09" /gene_synonym="fd19d09" /gene_synonym="gso1" /gene_synonym="sb:cb195" /gene_synonym="wu:fb39g09" /gene_synonym="wu:fd19d09" /codon_start=1 /product="glutamate-ammonia ligase (glutamine synthase) a" /protein_id="AAH53146.1" /db_xref="GeneID:100000775" /db_xref="ZFIN:ZDB-GENE-030131-688" /translation="MATSASSQLSKVVKQQYMELPQGDQVQAMYIWIDGTGEGLRCKT RTLDSEPKSIEDLPEWNFDGSSTYQAEGSNSDMYLIPAAMFRDPFRKDPNKLVLCEVV KYNRKTAETNHRHTCKKIMEMVGHQSPWFGMEQEYTILGTDGHPFGWPSNGFPGPQGP YYCGVGADKAYGRDIVEAHYRACLYAGVMICGTNAEVMPAQWEFQVGPCEGIDMGDHL WVARFILHRVCEDFGVVASFDPKPIPGNWNGAGCHTNFSTKEMREDGGLKCIEECIEK LGKRHNYHIRTYDPKGGLDNARRLTGHHETSNIHEFSAGVANRGASIRIPRAVGQEKK GYFEDRRPSANCDPYAVTEALIRTCLLDEEGDETVDY" BASE COUNT 545 a 395 c 439 g 589 t ORIGIN 1 gaacatcaaa cacataatat ccattcaact aagtggacaa tccactccta ttttatacat 61 tttattttct gttggtgtca aggtgtttta tagtaataaa aatggccacg tctgccagtt 121 ctcagttgag taaagtggta aaacagcagt atatggaact gcctcaggga gaccaagtac 181 aagccatgta tatctggata gatggaaccg gagaaggact acgatgcaag accagaacac 241 tggactctga acccaaaagc attgaagatc ttcctgagtg gaactttgat ggttccagca 301 cgtatcaagc tgaaggctcc aatagtgaca tgtatctcat cccagctgct atgttcaggg 361 atcctttccg caaagacccc aacaaactgg ttttatgtga ggttgtcaag tacaaccgga 421 aaactgcaga aaccaaccac cgtcatacat gtaaaaagat catggaaatg gtaggacatc 481 aaagcccttg gtttggcatg gagcaggagt acactattct gggtactgac ggacacccct 541 ttggttggcc ttccaatggg tttcctggtc ctcaaggacc ttactactgt ggagttggag 601 cagataaagc ctatggcaga gacatcgtgg aggcgcatta cagagcctgc ctatatgccg 661 gtgtgatgat ttgtggaacc aatgctgaag ttatgccagc tcagtgggag ttccaggttg 721 gcccgtgtga aggcattgac atgggagatc acttgtgggt agctcgtttt attttgcaca 781 gagtttgtga agacttcggt gtggtagctt catttgatcc taagccgatc ccaggcaact 841 ggaatggtgc tggttgccac actaacttca gcactaagga aatgcgggaa gatggtggac 901 tgaaatgtat tgaggagtgt atcgaaaagc ttggaaagag gcacaactat cacatccgca 961 cctatgatcc aaaaggaggc ctggacaatg ctcgtcgact cactggccac catgaaacct 1021 ccaacattca tgagttctct gctggtgtgg caaaccgtgg tgctagtatc cgcatcccac 1081 gagcagtggg acaagagaag aagggctact ttgaggatcg ccgcccgtct gccaactgcg 1141 acccctatgc tgtcactgag gccctaattc gcacatgttt gttagatgaa gagggtgatg 1201 aaactgtgga ctactagatc tcccatttac tggactgaat ttccctcccc ttctcgccat 1261 tctaattttt tttttttttt aaggccatca agccaaattt agtactgtat ctttttttct 1321 ataagggtgg ttctaacctg gcattttaat atcgttgaag ttgactggtc aacttaacat 1381 tttaagatat aaatctgaat ttaacctgat atgactgggg acatggtgtt gcagggcatg 1441 tctttcccct gttttggttt catttttccc tcattttaat ggtttcttgg ggaggccatt 1501 tctaatgttt gcattgaaaa ctctctgatt ccatgatttt acttttttgg tagttacgat 1561 ggactgaata aagaattaag tgcacagaag aacctaggac tgccaaggct agacaacatc 1621 taattacttt tgaaccaata gctagttgtt gttgtcatgt tgacttgact tttcaagtat 1681 gtaatgtttc gagatgtctt actgacagtg tattaaatgg caaaatttgg tgtccattta 1741 tttttactgt acacactgtt catgttgtgc ggtacaaagt cgcagtccaa taactgtcct 1801 gtttttatac ttgtggaact gttatttgtc ttgttaaatc cctgatttat caaggatttg 1861 atcctgttta tgtctaatac tatgatgtaa ctgcacctgt tttggtaaac ctgaagatgc 1921 taaaaggaaa ctaaaacatt tatttttacc acaaaaaaaa aaaaaaaa //