LOCUS BC050894 4169 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus WD repeat domain 6, mRNA (cDNA clone MGC:63325 IMAGE:5708880), complete cds. ACCESSION BC050894 VERSION BC050894.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 4169) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 4169) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (09-APR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: Plate: Row: Column: 0 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31981423. FEATURES Location/Qualifiers source 1..4169 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:63325 IMAGE:5708880" /tissue_type="Brain, mouse 15.5 dpc" /clone_lib="NIH_BMAP_EX0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..4169 /gene="Wdr6" /db_xref="GeneID:83669" /db_xref="MGI:MGI:1930140" CDS 78..3455 /gene="Wdr6" /codon_start=1 /product="WD repeat domain 6" /protein_id="AAH50894.1" /db_xref="GeneID:83669" /db_xref="MGI:MGI:1930140" /translation="MDAFGDYVWPRATSELILLPVTGLECVGDRLLAGEGPDLLVYNL DLGGHLRMVKRVQNLLGHFLIHGFRVRPEPKGDLDSEAMIAVFGSKGLKVVKVSWGQS HLRELWRSGLWNMSDWIWDVRWIEGNVAVALGHNSVVLYDPVIGCMLQDVPCTDRCTL SSACLVGDTWKELTIVAGAVSNELLIWYPATALTDNKPVAPDRRVSGHVGVIFSMSYL ESKGLLATASEDRSVRLWKVGDLRVPGGRVQNIGHCFGHSARVWQVKLLENYLISAGE DCVCLVWSHEGEILQAFRGHRGRGIRAIATHERQAWVVTGGDDSGIRLWHLAGRGYPG LGVSSLSFKSPSRPGALKAVTLAGSWRVLAVTDVGSLYLYDLEVKSWEQLLEDNRFRS YCLLEAAPGPEGFGLCALANGEGLVKVVPINTPTAAVEQKLFQGKVHSLSWALRGYEE LLLLASGPGGVIACLEISAAPTGKAIFVKERCRYLLPPSKQRWHTCSAFLPPGDFLVC GDRRGSVMLFPVRPCLFKKPGAGSKAITAAEAPGAGSGSGGSESVPTGIGPVSTLHSL HGKQGVTSVTCHGGYLYSTGRDSSYFQLFVHGGHLQPVLRQKACRGMNWVAGLRMVPD GSMVILGFHANEFVVWSPRSHEKLHIVNCGGGHRSWAFSDTEAAMAFTYLKDGEVMLY RALGGCIRPNVILREGLHGREITCVKRVGTVTLGPEFEVPNLEHPDSLEPGSEGPGLI DIVITGSEDTTVCVLALPTTTGSAHALTSVCNHISSVRALAVWAVGTPGGPQDTRPGL TAQVVSAGGRAEIHCFSVMVTPDASTPSRLACHVMHLSSHRLDEYWDRQRNKHKMIKV DPETRYMSLAICELDNDRPGLGPGPLVAAACSDGAVRLFLLQDSGRILHLLAESFHHK RCVLKVHSFTHEAPNQRRRLILCSAATDGSLAFWDLTTAMDKGSTTLELPAHPGLPYQ MGTPSMTVQAHSCGVNSLHTLPTPEGHHLVASGSEDGSLHVFTLAVKMPEPEEADGEA ELVPQLCVLEEYSVPCAHAAHVTGVKILSPKLMVSASIDQRLTFWRLGQGEPTFMNST VYHVPDVADMDCWPVSPEFGHRCALAGQGLEVYNWYD" BASE COUNT 889 a 1126 c 1211 g 943 t ORIGIN 1 gctctccaga cggctggttc tcgcgagaac gcagctctct tcttgtccgt ggcagccaca 61 gcagctccag gaacgtcatg gacgctttcg gggactatgt ctggccgcgg gcgacttccg 121 agctcatact cctcccggtt acgggtctgg agtgtgttgg ggacaggctg ctggcgggcg 181 aggggcctga tttactggtg tacaacttgg accttggtgg gcatctccga atggtgaaga 241 gagtccagaa cctgcttggt cactttctca tccatgggtt ccgagtgcga ccagagccta 301 aaggagacct ggactctgag gccatgatag ctgtgtttgg gagcaagggc ctcaaagttg 361 tgaaagtcag ctggggtcaa agccatcttc gggagctctg gcgctctggc ctgtggaaca 421 tgtccgactg gatctgggat gtccgctgga tcgagggtaa cgtagccgtg gccttgggcc 481 acaactcggt ggtactgtat gacccagtga tagggtgcat gctgcaggac gtcccctgca 541 cagacaggtg taccctgtcc tcagcctgcc tggttggtga cacctggaag gaactgacca 601 tcgtggctgg cgcggtttcc aatgagctcc tgatctggta cccagccact gctttaacag 661 acaacaaacc cgtggcccct gaccggcggg ttagtggcca tgtgggtgtc atctttagca 721 tgtcatacct ggaaagcaag ggcctgctgg caactgcttc agaagaccga agtgttcgtc 781 tctggaaggt gggggacctc cgggtgcctg ggggtcgggt tcagaatatt ggccactgct 841 ttgggcacag tgcccgagtg tggcaggtga agctcttaga gaactatctc atcagtgcag 901 gagaagactg tgtctgcttg gtgtggagcc acgaaggcga gatccttcaa gcctttcggg 961 gccaccgggg ccgaggtatc cgggccatag ccactcacga gaggcaggcc tgggtggtca 1021 ctgggggaga cgactcaggc attcgactct ggcacctggc aggccgaggg tacccaggct 1081 tgggcgtctc atccctgtcc ttcaaatctc ctagccggcc aggtgccctc aaggctgtga 1141 ctctggctgg ttcctggcga gtcctggcag tgactgatgt ggggtccctg tacctctacg 1201 accttgaggt caagtcctgg gagcagctgc tggaggacaa tcgctttcgg tcttactgcc 1261 tgctagaggc agctcctggg cccgagggct ttggactctg tgccttggcc aacggggagg 1321 gtcttgttaa ggtggttccc atcaacaccc ccaccgctgc cgtcgagcag aaactgttcc 1381 aggggaaggt gcacagcctg agctgggccc ttcgtggtta cgaggagctg cttttgttag 1441 catcgggccc tggtggggtg atagcttgtt tggagatctc agctgcaccc actggcaagg 1501 ctatctttgt caaggaacgt tgccggtacc tccttccccc aagcaagcaa cgatggcaca 1561 catgtagtgc tttcctgccc ccgggtgact tcctcgtctg tggggaccgc cgtggctctg 1621 tgatgctatt ccctgtcaga ccatgtctat tcaaaaagcc tggggccgga agcaaggcta 1681 ttactgcagc tgaggcacct ggagctggta gtgggagcgg tgggtctgag agtgtcccaa 1741 caggaatagg ccccgtctct acactccatt ctctgcatgg gaaacagggt gtgacctcag 1801 ttacctgcca tggtggctac ctatacagca cagggcggga tagctcctac ttccagctct 1861 ttgtacatgg cggccacctc cagccggtcc taaggcagaa agcctgtcga ggcatgaact 1921 gggtagctgg gcttcggatg gtgcctgatg gaagtatggt catcttgggt ttccatgcca 1981 acgagtttgt agtgtggagc ccccggtccc atgagaagct gcatatcgtc aactgtgggg 2041 gagggcaccg ctcctgggcc ttttctgata ctgaggcagc catggccttt acctacctga 2101 aggatggtga ggtcatgctc tatcgggctc taggtggctg catccggccc aatgtgattc 2161 tccgggaggg tctgcatggc cgtgaaatca catgtgtaaa gcgtgtgggc acagtgaccc 2221 tgggccctga atttgaggta cccaacttgg agcatcctga ctccctggag cctggcagtg 2281 aggggcctgg tctgattgac atagtgataa caggcagtga ggacactact gtctgtgtcc 2341 tagcacttcc caccaccaca ggctcagccc acgccctcac ttctgtctgt aaccatatct 2401 cctctgtgcg agccctggca gtgtgggctg ttggcacccc aggtggccca caggatactc 2461 gaccagggct cactgctcag gtagtgtctg cagggggccg agcggagatt cactgcttca 2521 gcgtcatggt cactccggac gctagcaccc ccagccgcct tgcctgtcat gtcatgcacc 2581 tttcatccca ccggctggat gagtactggg accggcagcg gaacaagcac aagatgatca 2641 aggtggaccc tgagaccagg tacatgtctc ttgctatttg tgagcttgac aacgataggc 2701 ctggcctcgg ccctggcccc cttgtggctg cagcctgtag tgatggagca gtgaggctct 2761 ttctcctgca ggactctggg cgaattctgc atctcctagc tgagtctttc caccacaagc 2821 ggtgtgtcct caaagtccac tccttcacac atgaggcacc taaccagcgt cggaggctga 2881 tcctgtgcag tgcagctaca gatggcagcc tagccttctg ggatctcacc acggcaatgg 2941 acaaaggctc tactaccctg gagcttccag cacaccctgg gcttccctac cagatgggca 3001 ccccctccat gaccgtgcaa gcccatagct gtggcgtcaa tagcctgcac actttgccta 3061 cacctgaggg ccaccacctt gtggccagtg gcagtgagga tgggtccctg catgtcttca 3121 cacttgctgt gaagatgcca gagccggaag aagctgatgg ggaggctgag ctggtgcccc 3181 agttatgtgt cctagaggaa tattccgtcc cctgcgcaca tgctgcccat gtgacaggcg 3241 tcaagatcct aagtcccaag ctcatggtct cagcctccat agaccagcgg ctgaccttct 3301 ggcgtctggg acagggtgag cccaccttca tgaatagcac tgtgtaccat gtgccagatg 3361 tggccgacat ggactgctgg cctgtgagcc ctgagtttgg ccaccgctgt gctctggcag 3421 gtcagggact tgaggtttac aactggtatg actgagttat cccagtgggt ggagaactga 3481 gcacagggcc tgactgcaga cagtagagca gggatcagct gtctgtgtca cgctcagtgt 3541 gctctgggga ggcgaggcag taccatagtt ctcgcaagta ttccagtagg gtgttgcata 3601 ggaggaccaa gaacacgcct cactctcaca ataggatgaa actgtattta ttctgacttt 3661 aagtgcccaa catctgtgag gtcttgtttc tttcccagtt gatgctttta taaacattcc 3721 cagttattgg gcccttagat gtggctcagc ggagggaggc ccagcatagc caagcctgtg 3781 tggaacacct cacgcactgc cctcaaaagc tgtaggcgag caaacatctg accaaagagg 3841 tgtggccgag gttcctgaaa gaaaagcagc caggcgcatc ctcatttccc gtgtgctcag 3901 ccttgcccac atttcccgca gacccccctt gctgtatgct cacccctaga atatgtactc 3961 ggttatagta ggagctgaaa tccatgctga gctgcaccag gaacttgcat acctagagac 4021 agacgttgag tcgttgagct gttgtctttt ttcttgtgtt acaacccaga ataaagaata 4081 atgtgtgaaa tgaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa 4141 aaaaaaaaaa aaaaaaaaaa aaaaaaaaa //