LOCUS BC048169 3947 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus RIKEN cDNA 1700020O03 gene, mRNA (cDNA clone MGC:61187 IMAGE:6821902), complete cds. ACCESSION BC048169 VERSION BC048169.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3947) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3947) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (06-MAR-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: Plate: Row: Column: 0 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 42475993. FEATURES Location/Qualifiers source 1..3947 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:61187 IMAGE:6821902" /tissue_type="Brain, mouse, 13.5,14.5,16.5,17.5 dpc" /clone_lib="NIH_BMAP_FY0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..3947 /gene="1700020O03Rik" /gene_synonym="4732487G21Rik" /gene_synonym="A630090I05Rik" /db_xref="GeneID:70373" /db_xref="MGI:MGI:1917623" CDS 87..1535 /gene="1700020O03Rik" /gene_synonym="4732487G21Rik" /gene_synonym="A630090I05Rik" /codon_start=1 /product="RIKEN cDNA 1700020O03 gene" /protein_id="AAH48169.1" /db_xref="GeneID:70373" /db_xref="MGI:MGI:1917623" /translation="MDELVHDLASALEQTSEQSKLGELWEEMALSPRQQRRQLRKRRG RKRRSDFTHLAEHACCFSEASESSLDEATKDCREVAPLTNFSDSDDTVVAKRHPALSA IIRGKQHSWPESDSFTENAPCRPLRRRRKVKRVTSEVAASLQQKLKVSDWSYERGCRF KSAKKQRLSRWKENTPWTSSGHGLCESAENRTFLSQPGRKERMECEAEEQKHGSDENM SECDTSSVCSSSDTGLFTNDEGRQGDDEQSDWFYEGECVPGFTVHNLLPKWAPDHCTE VERMDSGLDKLSDPTFLLPSRPAQRGYHGRLNRLPGAAARCLRKGRRRLPGKEASMSS LGTERIGHTISDPRQTDFWLPSAGKRERNQFNPLSPLYSLDVLADASHRRCSPAHCSA RQASVHWGPPCPRDIKRKRKPVASASFSSPSPVHPDVLEPAIPAQKPPDSEWLDGTSA AEKATAFPPATFFKMPQEKNSGCSSSPGTNGC" BASE COUNT 961 a 946 c 1033 g 1007 t ORIGIN 1 gaggtcagag agggaaaccc aggctgggag ctacggcccc gaaggcggcg ccgggtgcaa 61 gcgactgcgg cagccgatgc ggcctcatgg atgagctagt gcatgacctg gcctcagcct 121 tggagcagac atcggagcag agcaagcttg gtgagctgtg ggaggagatg gccctgagcc 181 ccagacagca gaggcggcag cttcgcaaac gccgaggacg gaagcgccgg tctgacttta 241 ctcacctggc agagcacgcc tgctgcttca gcgaggcctc tgagtcaagt ctggatgaag 301 ccaccaagga ctgccgagaa gtggctccgc tcaccaactt cagtgactct gatgacacgg 361 tggtggccaa acggcaccca gctctcagtg ccatcattag gggtaagcaa cattcttggc 421 ccgagtctga ctcctttacg gaaaacgcac cttgtcgacc cctcaggcgc cggcggaagg 481 tgaagcgagt gacgtccgag gtggctgcca gccttcagca gaagctgaaa gtgtcagatt 541 ggagctatga gagaggctgc aggttcaagt ctgccaagaa gcagcgtcta tcccgctgga 601 aggagaatac tccctggacc tcatctggcc atgggctgtg tgaatcagca gagaatcgga 661 ctttcctaag ccaaccagga aggaaagaaa ggatggagtg cgaagccgaa gagcagaagc 721 acggctctga cgagaacatg tccgagtgtg acactagcag tgtgtgcagc agcagtgaca 781 cggggctctt caccaatgat gaaggacgac aaggggatga tgagcagagt gattggtttt 841 atgaaggaga atgtgtcccc ggattcactg tccataacct tctgcccaag tgggctcctg 901 atcactgcac tgaagtagaa aggatggact ccggcctgga taaactctca gaccccacgt 961 tccttttacc ttcccggcca gctcaaagag gataccatgg tcgtctgaat aggttgccag 1021 gagctgcagc tcgttgcctc aggaaggggc ggagaaggct gcctgggaag gaggcgagca 1081 tgagcagcct ggggacggag aggatcggcc ataccatcag tgacccccgg cagacagatt 1141 tctggttacc atcagctggg aaaagagaac ggaatcagtt taatccactc tcccctcttt 1201 actccctgga cgttcttgct gatgcttctc atcgaaggtg ctcacctgca cactgctctg 1261 ccaggcaggc aagtgtacac tggggaccac catgtccacg tgacattaag aggaaacgga 1321 aacctgtggc ctcagcatct ttttctagcc ctagtccagt gcacccagat gttctggagc 1381 cggccatccc agctcagaag cctcctgact ccgagtggtt ggacgggacc tctgcagcag 1441 agaaagccac tgcctttcct ccagccacgt ttttcaaaat gccacaggaa aagaattctg 1501 gctgcagctc tagcccagga accaatgggt gttgaaactt tgtattgtac agtcttagtg 1561 ttctgattgg cagtcttggg cctaatgcca caaggactga ctcctcgtca cgcacagcag 1621 ttgctctttc tttgagaaaa tatttgggga atcttttttt gtaaaatatc aattttcctt 1681 aagtgggtgg ggcaccctct gctgtcccct tccttcgttg ctcgcccacc attcaccttc 1741 agctgctgcc ttagagctgc ctctccttgg cagctgtgtc tttgttcctg aaaatctagc 1801 aacagctttt gcgtaccttc tgtgtagagc ttttcatgtc gctgatgaaa tcctaaattt 1861 gcagccagtt ggaaacacgt tgctggatgg gattgtgtct gtgcagtaag gctggccatc 1921 gagtctccat cccctcagga ccagtaagag acagcaacca agttctcagc ttagggcccc 1981 agaagagaca ccagcaggat ggcgtgggag ccttcccttg cctgcacatg gtctgagggg 2041 atcgccagcg gctccattgt acctgacctc agcctcctgc tcagtgttct cccgataggg 2101 cccagaggtc tgtgtgctcc agtgcagatg ggggtttagg tgctcggcaa actagtggat 2161 gatgtgctga ccccagccta aggctttatc tcctaagtgg aatttcactg ttagtatttt 2221 agaggtcggt aaccagtggt aagcagaaac tcctgctctt atctgttatg taatggttag 2281 ttggggccat ggtttaggaa gaaacgatgt ctttttgaca tgcctttcta tgtggtgtgt 2341 ttatgaccgc tcagctgcaa gtacagttgt gtatatagtt gtgcccgaag ttgatgctac 2401 tttgtcaagg tgaggaggaa gtgagtgcct ggagctgctg gggaagagcc acatttccca 2461 aaagtgtcat ctggagcacc tgccattcag ggctgtgctt gacacagctc tctctttttg 2521 tatcagctga gtgtgttgac tgtgaaacac atggtagcgt tgttaaatgc tcgctgcctt 2581 ggtcatgtca gagagaaaaa cctctcctta agacagctag caggtgatcc ggtgcgtcct 2641 ctccctgaag ggtcattatc cctcccaggg agtgtaagca gtgtgttccc ccgagagcta 2701 cattcatttg ggaggccact ctgtgactct tcagcagtga ggtgggcagg ggccagaatg 2761 tgagtctgtt tgcaaaggga agcctgaagc tcggtggctg agaatgtatc agctgaccat 2821 aacaaaaatg gtagaggggg tgcagaaaga gattgcagga tgagagagta acaccaaacc 2881 ctgtcccccc cccccccccc ccgagtcact ctggtcacaa ggtgacttac tgtaactgac 2941 tgtcttatgg gcgtctcagc tgcatccaca gaagacaggg actgtggcac tgttacatag 3001 ttcaaaggtg aaagtggatg tgtgtgtgcc gtctgctcct gcagtggcca gtggaacaca 3061 tttctactgt cctgagttgg gttgagggag aaatctactg acgatgcttt ttaaatattt 3121 ccaaactggt tcactggtct tgatgacggc ttgttgagac ctccacagtt aggtgcagag 3181 gtatccccta gctttcctct gtggtacatt gtggtatact gcctggtccg tcgtcctctt 3241 tttacctggg atttaaagta gcttatatat acatatttat ttatatttta aatatctctc 3301 tgaagccatg ccaatattca gaggtgaagg cagagttgca tgctttactc cattgtatga 3361 gtgagcccac actgaaacaa cagacgtccc tgctaggctg ccctggttat ataatctgtt 3421 ctttctcatt ggtgtcccga gtcagcctaa ggcccacacc taggaagcgc tttcatgact 3481 gtttatcatc tttgtttgtc atgcatttct acacatttct ggatacttct gacagggatc 3541 atccaagact acagcatcta cctataatga atgggaataa agttatttac caagaaaata 3601 gaatattaag cacataaatt ctttctaaaa cagggttgta atttatggtc attttacagt 3661 gtaaatgcat gcttaaggaa gccatttatc ctgcttattt tctatgttaa ccagcttcat 3721 ttgtatttta aaccttacat ttaaaaaatt gtttatggca cagtggataa tgtcaaaaat 3781 taagatctgt ctttcaagga gagatgcagt tttgcaatca agttttgttg tcagtattga 3841 agatcacctg cagcccttaa agatggccat tgattgtgct catgcatttc atatcagaat 3901 taatgaagcc aagtgccatg gttctgacaa aaaaaaaaaa aaaaaaa //