LOCUS BC046235 2870 bp mRNA linear ROD 20-OCT-2004 DEFINITION Mus musculus RIKEN cDNA 2700050L05 gene, mRNA (cDNA clone MGC:58090 IMAGE:6817045), complete cds. ACCESSION BC046235 VERSION BC046235.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2870) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2870) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (31-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Jim Lin, University of Iowa cDNA Library Preparation: M. Bento Soares, University of Iowa cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: University of Iowa, Dr. M. Bento Soares and Dr. Thomas L. Casavant. Web site: http://genome.uiowa.edu Contact: bento-soares@uiowa.edu; tom-casavant@uiowa.edu Bonaldo,M.F., Akabogu,I., Bair,T., Bair,J., Crouch,K., Davis,A., Fishler,K., Keppel,C., Kucaba,T., Lebeck,M., Melo,A., Schaefer,K., Scheetz,T., Smith,C., Snir,E., Tack,D., Trout,K., Walters,J., Casavant,T., Soares,M.B. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: Plate: Row: Column: 0 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31342472. FEATURES Location/Qualifiers source 1..2870 /organism="Mus musculus" /mol_type="mRNA" /strain="C57BL/6" /db_xref="taxon:10090" /clone="MGC:58090 IMAGE:6817045" /tissue_type="Brain, mouse, 13.5, 14.5, 16.5, 17.5 dpc" /clone_lib="NIH_BMAP_FW0" /lab_host="DH10B" /note="Vector: pYX-ASC" gene 1..2870 /gene="2700050L05Rik" /gene_synonym="MGC27934" /gene_synonym="MGC58090" /db_xref="GeneID:214764" /db_xref="MGI:MGI:1919831" CDS 115..2211 /gene="2700050L05Rik" /gene_synonym="MGC27934" /gene_synonym="MGC58090" /codon_start=1 /product="2700050L05Rik protein" /protein_id="AAH46235.1" /db_xref="GeneID:214764" /db_xref="MGI:MGI:1919831" /translation="MADSDENGSYSTSSDPADDNKAVAIIKSVGELSVPEKYKSIHQI RPSCAFPVCHDTEERCRLVLSYVLEGLKSVDSSIKKESDLPAADPSTPIPLKYEDEST RGGPEGLEKQMALFLDKMGSIQKGSCSGQSGMTPGSWQHKMKLQLILKSSKAYYILSD AAMSLQKYGRALRYIKLALQSHDTYCCLCTNMLSEVLLFLSQYLTLCGDIQLMLAQNA NNRAAHLEEFNYQTKEDQEILHSLHRESSCQGFAWATDLSTDLESQLSVSCKCYEAAN EILQFSDLKSQNPEHYVQVLKRMGNIRNEIGVFYMNQAAALQGERVVSKSVSAAEQQL WKKSFSCFEKGIHNFESIDDATNAALLLCNTGRLMRVCAQAHCGAEDEFKREFSPEEG LYYSKAVDYYLKALRSLGTRDMHPIVWDSVNWELSTTYFTMATLQQDYAPLSRKAQEQ IEKEVSEAMMKSLKHCDVDSATARQPLCQYRAATIHHRLASMYHSCLRNQVGDEHLRK QHRVLADLHYSKAAKLFQLLKDAPCELLRVQLERVAFAEFQMSSQNSNVGKLKTLSGA LDIMVRTEHAFQLIRKELVEECDQPKNDEATPAADSSPNLNREEVIKLLSIFESRLSF LLLQSIKLMSSSKRKMSSNAEEDIVLQTNKQIYSQLLRATANRNSTLLERIEVVICLL EQLASGSSRSSGSAVP" BASE COUNT 831 a 615 c 697 g 727 t ORIGIN 1 gccaactaca tgctttcaga gcttttccag ctggatgagc ctaaaaagga ggaaagttca 61 gactcccctt taaatgagaa ttcggatgaa agctacagtg aagaggagga ggagatggca 121 gacagtgatg agaatggatc ctacagcacc agctctgacc cagcagatga caacaaggca 181 gtggctatca ttaagtctgt tggagaactg tcagtaccgg aaaaatacaa gtcgattcat 241 cagatcagac ccagttgtgc atttcccgtt tgccatgaca cagaagagcg ctgtcgactc 301 gtccttagct atgtgttgga gggtttaaaa tctgtagata gtagcatcaa aaaagaaagc 361 gaccttccag cagctgaccc cagcactcct atccccttaa aatatgaaga tgaatccaca 421 aggggtggcc ctgaggggct ggagaagcag atggccttgt tcctggacaa aatgggctcc 481 attcagaagg gcagttgttc tgggcagtct ggaatgaccc ctggttcttg gcaacataaa 541 atgaaacttc agctgattct caagtcatca aaggcctact acattttgtc agatgctgcc 601 atgagtcttc agaagtatgg aagagcattg agatacatta agctagctct acagagccat 661 gatacttact gctgcctctg caccaacatg ctttctgaag tgctgctgtt cctctctcaa 721 tacctgacac tttgcggcga catccaactc atgctggccc agaatgcaaa taaccgagca 781 gcacacctcg aggagtttaa ttaccaaaca aaagaagacc aggagatcct ccacagtctc 841 cacagagagt ccagctgcca gggatttgca tgggcaacag atctatctac agacttagaa 901 agtcaactct cagttagttg taaatgttat gaggctgcta atgaaatctt gcaattcagc 961 gacttaaaaa gtcagaatcc agaacactat gtacaggtgt tgaagagaat gggaaacatt 1021 agaaatgaaa tcggtgtatt ctacatgaat caggctgctg cactgcaggg tgagcgagta 1081 gtgagcaaat ctgtgtctgc tgcagagcaa caattgtgga aaaaaagctt ttcttgtttt 1141 gaaaagggga ttcacaactt tgagtcgatt gatgatgcta caaatgctgc ccttctgctg 1201 tgcaacacgg gaagactcat gcgggtctgt gcgcaggcgc actgcggtgc agaggatgag 1261 ttcaaacggg agttctctcc agaggagggc ttgtattaca gcaaggccgt tgattactat 1321 ttgaaggctc tgaggtcatt gggaacgaga gacatgcacc caattgtttg ggattctgtg 1381 aactgggaat tgtccactac atacttcacc atggcgactc tgcagcaaga ttatgctcca 1441 ttatccagaa aagctcagga gcagattgag aaagaagtga gcgaggctat gatgaagtcc 1501 ctgaagcact gcgatgttga ctcagcaact gctcggcagc ccctctgtca gtaccgagct 1561 gcgaccatcc atcacaggct ggcttccatg taccacagct gtctgaggaa ccaggttggt 1621 gatgagcatc ttaggaagca gcaccgagtg ctggcagatc tccactacag caaagctgcg 1681 aagctctttc agcttctcaa agacgctccc tgtgaactgc ttagagtgca gctagaaagg 1741 gtggcatttg cagaatttca gatgagcagt cagaatagca atgttggaaa gttaaaaaca 1801 ttatctgggg cacttgatat catggtgaga acggagcatg cgttccagct catccggaag 1861 gagcttgtag aggaatgtga ccagcccaag aatgatgagg ctacaccggc tgctgattct 1921 tcacctaatc ttaatcgaga agaagtgatc aaactcctta gtatatttga atctcgtctg 1981 tcattccttc tccttcaatc catcaaactg atgtcgtcat ctaaaaggaa aatgagcagt 2041 aacgctgaag aagacatagt cctccaaacc aacaagcaga tttactccca gcttttgaga 2101 gcgactgcca acagaaactc aactctgctg gaaagaattg aagtcgtcat ctgtttgctg 2161 gagcagcttg cctccggtag cagccgatcg agtggcagtg ctgtcccctg actgcagtgg 2221 tactggagga ctgtcttgtc agtgccttcc cgtcctggag ctgtctgtct gtccactcgg 2281 tgctgagact tattaaatat gaggacatag cgtttaatca ggtccacagt ggatacttgc 2341 ttcccatggc aggcagagga tgtggggtgg ttcggcttct tgtgaaggtg agaaactata 2401 atggaaccga aagctttgta aatgtatttc ctcgagaagt acatggttcc ttagtgataa 2461 cacctcctgc gatgtcgcga gacttaaaat attcttgacg ttaaaacact taggtgtaag 2521 atgcgattat tttggataaa atgttactct ggccaaggga actcttattc aagtgatttc 2581 atggattcaa atggcatgta gaaacagtgc gcatcagcgt ctacttctaa gtgacacaaa 2641 agtgtcccct ttccaagctg tggtgtgcgc gggaggtttt gacgactgag aattgtgcag 2701 gtctcctttc agtgcatgct ctgaagagac tccttctctg actgtgtatg acattggtaa 2761 agaataggta ctatcacttt ctcattttaa acttgaaact gtgaataagg taagagaatt 2821 attttgaata aataagctat ttatttaaaa taaaaaaaaa aaaaaaaaaa //