LOCUS BC044345 2070 bp mRNA linear VRT 01-MAR-2005 DEFINITION Danio rerio polyhomeotic-like 2 (Drosophila), mRNA (cDNA clone IMAGE:2640653), complete cds. ACCESSION BC044345 VERSION BC044345.1 KEYWORDS . SOURCE Danio rerio (zebrafish) ORGANISM Danio rerio Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio. REFERENCE 1 (bases 1 to 2070) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2070) AUTHORS Director MGC Project. TITLE Direct Submission JOURNAL Submitted (17-JAN-2003) National Institutes of Health, Mammalian Gene Collection (MGC), Cancer Genomics Office, National Cancer Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami cDNA Library Preparation: Dr. Sumio Sugano and Dr. Ko-ichi Kawakami cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Institute for Systems Biology http://www.systemsbiology.org contact: amadan@systemsbiology.org Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 101 Row: k Column: 13 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2070 /organism="Danio rerio" /mol_type="mRNA" /strain="AB" /db_xref="taxon:7955" /clone="IMAGE:2640653" /tissue_type="Whole body, adult, (one male and one female, including unfertilized eggs)" /clone_lib="Sugano Kawakami zebrafish DRA" /lab_host="DH10B" /note="Vector: pME18S-FL3" gene 1..2070 /gene="phc2" /gene_synonym="2745" /gene_synonym="5044" /gene_synonym="cb218" /gene_synonym="edr2" /gene_synonym="fb98c05" /gene_synonym="id:ibd2745" /gene_synonym="id:ibd5044" /gene_synonym="ph2" /gene_synonym="ph2alpha" /gene_synonym="ph2beta" /gene_synonym="ph2[a]" /gene_synonym="ph2[b]" /gene_synonym="wu:fb98c05" /gene_synonym="zgc:100775" /db_xref="GeneID:171465" /db_xref="ZFIN:ZDB-GENE-020312-1" CDS 219..1151 /gene="phc2" /gene_synonym="2745" /gene_synonym="5044" /gene_synonym="cb218" /gene_synonym="edr2" /gene_synonym="fb98c05" /gene_synonym="id:ibd2745" /gene_synonym="id:ibd5044" /gene_synonym="ph2" /gene_synonym="ph2alpha" /gene_synonym="ph2beta" /gene_synonym="ph2[a]" /gene_synonym="ph2[b]" /gene_synonym="wu:fb98c05" /gene_synonym="zgc:100775" /codon_start=1 /product="phc2 protein" /protein_id="AAH44345.1" /db_xref="GeneID:171465" /db_xref="ZFIN:ZDB-GENE-020312-1" /translation="MTSGSGNNAPTVTGSAPQNGESKPPPQAVVKPQILTHVIEGFVI QEGAEPFPVERPSLLIENLKQKQHHAYSDLQKHNADSEMEDLSLQELNNQPEPVRTCE FCGNVDFAFNFKRSKRFCSTVCAKRYNVGCTKRMGLFPGKSSPEDTKKPKASDESPKN CSTETRKRNPSIQTTTGASLLSPHPSHPSHGESSQCSDMSSYEEPITPLSNSSFGAPI EHEESFDHSRELTPLLTQHFLASDPTKWNVEDVYEFICSLPGCHEIAEEFRSQEIDGQ ALMLLKEDHLMSTMNIKLGPALKIFARISMLKDS" BASE COUNT 593 a 466 c 451 g 560 t ORIGIN 1 gctcagctca cattgaggga atagcttaga acaaacaaac ccacgaacgc agaaagtttg 61 gatcgggtcg ttttttgaac agctttgtat ttacagccag tggattatgg aagtgtactc 121 ggaagcgctg gaatgctgaa ttcactttag cgtttcccct tttcggcgct tgaaagtgca 181 gtgtgaatgt taaggcaggt gtgggttcac ctccagccat gacctcgggc agcggtaata 241 atgcgcccac ggtgaccggc agcgctccgc aaaatggcga gagtaaaccg ccgccacagg 301 ctgtagtgaa gccccagatc ctcactcatg tcatcgaggg attcgtgatt caggagggag 361 cggagccttt tcccgttgaa cgtccgtcct tgctgatcga gaatttaaaa cagaagcagc 421 atcatgctta ttcggatcta cagaagcaca acgcagactc tgagatggag gatctgtctc 481 tgcaagagct gaataatcaa cccgagccag tgcggacatg tgaattctgt gggaatgtag 541 acttcgcatt caacttcaag agatccaagc ggttttgctc tacagtgtgt gcgaagagat 601 ataatgttgg atgcacaaag cgaatgggcc tttttccagg gaaatccagc ccggaggaca 661 caaagaaacc aaaagcctca gatgaaagtc ctaaaaactg cagcacagaa accaggaaac 721 ggaatccaag catacaaacg accacaggag cttctttgtt gtccccacat ccatctcatc 781 caagtcatgg tgagtccagc cagtgctcag acatgtccag ctatgaagag cccatcacac 841 cactgtccaa ctcgagcttt ggagccccga ttgagcacga ggaaagtttt gatcacagca 901 gagagcttac tcctctactc acgcagcact tcctggccag cgaccccaca aagtggaacg 961 tcgaggatgt ttatgaattc atctgctctc tgccaggttg ccatgagatc gctgaagagt 1021 ttcgctctca ggagattgat ggccaggcct tgatgctcct caaagaggat catctcatga 1081 gcacaatgaa catcaaactg ggccctgcac tgaagatctt cgcccgcatc agtatgctca 1141 aggactcgta gccttaccca caacttaatc tcgtcggaaa ggacaccctc acaactctgc 1201 actggtttct ttgtcccatt gtggctttgg gtcctgggga ttgctgctcc tcaaaaccac 1261 aaacttgtgt atagttctca tcaccgtcga acggtttcat cccaaaagca tgatggtgtg 1321 attacaaatc tctggtgtat gccaagtctg ggaaggggtg acaatccatc atgtcaagaa 1381 gacaagcaca acagcttaac catttgtgca agcaaatgtt cttcgttaat agcatgaaaa 1441 gaggtttaca gttttttttc tgtcttgaac tggactttgt gatttgtttg tcaaagtgac 1501 actgtcgtag ttctggttct cattgtcaca gcaaagtaat gtttggttag cgaaggaaaa 1561 ctttgtacct ttagccttgc agtgtgccat catttgtaag tagtaaaagt gttcaggttt 1621 cttcatctca caggatattc cttagttcac atgcaattag attttgtact caaatgtggc 1681 attttttaca ctgatacaca gggataatag gtattaaatc tgactctcca atacgtgcct 1741 aatgtttttt ttaaatatcc caaagattat ggagacccat acctttatgc ttgtgaacag 1801 aattcaggtt taaagactgc cattaatctc actttacaga acccatcttg gtaagatctg 1861 agaaacaact ggcattattt ttcataaatt gctgttatcc caaccttcaa tgtgtgcact 1921 cacatttgga aagctagtgc agctcgtgtg tctattttta cattcatcat ttgatcaaat 1981 ttctgtattt attgagagcg attctctgat tctgttttat atttgaaaat aaaactgaaa 2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa //