LOCUS BC043987 2333 bp mRNA linear VRT 12-OCT-2007 DEFINITION Xenopus laevis peptidyl-glycine alpha-amidating monooxygenase A precursor, mRNA (cDNA clone IMAGE:5570364), complete cds. ACCESSION BC043987 VERSION BC043987.1 KEYWORDS . SOURCE Xenopus laevis (African clawed frog) ORGANISM Xenopus laevis Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Amphibia; Batrachia; Anura; Pipoidea; Pipidae; Xenopodinae; Xenopus; Xenopus. REFERENCE 1 (bases 1 to 2333) AUTHORS Klein,S.L., Strausberg,R.L., Wagner,L., Pontius,J., Clifton,S.W. and Richardson,P. TITLE Genetic and genomic tools for Xenopus research: The NIH Xenopus initiative JOURNAL Dev. Dyn. 225 (4), 384-391 (2002) PUBMED 12454917 REFERENCE 2 (bases 1 to 2333) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 3 (bases 1 to 2333) AUTHORS Klein,S. and Gerhard,D.S. TITLE Direct Submission JOURNAL Submitted (10-JAN-2003) National Institutes of Health, Xenopus Gene Collection (XGC), National Institute of Child Health and Human Development, 6100 Executive Boulevard, Room 4B01, Rockville, MD 20892-7510, USA REMARK NIH-MGC Project COMMENT Contact: XGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Dr. Igor Dawid cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: National Institutes of Health Intramural Sequencing Center (NISC), Gaithersburg, Maryland; Web site: http://www.nisc.nih.gov/ Contact: nisc_mgc@nhgri.nih.gov Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B., Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S., Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P., Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R., Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C., McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W., Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L., Young,A., Zhang,L.-H. and Green,E.D. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 97 Row: b Column: 23 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 27694587 This clone has the following problem: The cds is short compared to the longest cds in the locus. FEATURES Location/Qualifiers source 1..2333 /organism="Xenopus laevis" /mol_type="mRNA" /db_xref="taxon:8355" /clone="IMAGE:5570364" /tissue_type="Embryo, stage 31/32, Xenopus" /clone_lib="NICHD_XGC_Emb4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2333 /gene="pam-a" /gene_synonym="AE-I" /gene_synonym="PAL-A" /gene_synonym="PHM-A" /db_xref="GeneID:379207" CDS 273..1475 /gene="pam-a" /gene_synonym="AE-I" /gene_synonym="PAL-A" /gene_synonym="PHM-A" /codon_start=1 /product="pam-a protein" /protein_id="AAH43987.1" /db_xref="GeneID:379207" /translation="MASLSSSFLVLFLLFQNSCYCFRSPLSVFKRYEESTRSLSNDCL GTTRPVMSPGSSDYTLDIRMPGVTPTESDTYLCKSYRLPVDDEAYVVDFRPHANMDTA HHMLLFGCNIPSSTDDYWDCSAGTCMDKSSIMYAWAKNAPPTKLPEGVGFRVGGKSGS RYFVLQVHYGNVKAFQDKHKDCTGVTVRVTPEKQPQIAGIYLSMSVDTVIPPGEEAVN SDIACLYNRPTIHPFAYRVHTHQLGQVVSGFRVRHGKWSLIGRQSPQLPQAFYPVEHP VEISPGDIIATRCLFTGKGRTSATYIGGTSNDEMCNLYIMYYMDAAHATSYMTCVQTG EPKLFQNIPEIANVPIPVSPDMMMMMGHGHHHTEAEPEKNTGLQQPKREEEEVLDQGL ITLGDSAV" BASE COUNT 687 a 495 c 483 g 668 t ORIGIN 1 gtgatgtcac cattcagttg tgggtgatca gcagtgtgcc agcatctaaa ggaaccaaat 61 cattgcaact tgtaccctga tcaggcacct tatactggac gcaagtgcac ttcttccctc 121 aagaagatca tatcccggga agaatgtgta tttctggtta cctgcggggc tagcactgat 181 ggagtagggg gatttatctg gtttcctaat taccaggatt acaacttgcc tttaatttac 241 tcctgcagta aggcacagac cacagggtgg acatggccag cctcagtagc agctttcttg 301 tgctctttct cttatttcag aacagctgct actgtttcag gagtcccctc tctgtcttta 361 agaggtatga ggaatctacc agatcacttt ccaatgactg cttgggaacc acgcggcccg 421 ttatgtctcc aggctcatca gattatactc tagatatccg catgccagga gtaactccga 481 cagagtcgga cacatatttg tgcaagtctt accggctgcc agtggatgat gaagcctatg 541 tagttgactt cagaccacat gccaatatgg atactgcaca tcacatgctt ctatttggat 601 gcaatatacc ttcttccact gatgattact gggactgtag tgcgggaact tgcatggaca 661 aatccagtat aatgtatgcc tgggcaaaga atgcaccacc caccaaactt ccagaaggag 721 ttggctttcg tgttggaggg aaatcaggca gtagatattt tgtgcttcaa gttcactatg 781 gaaatgtgaa agcattccag gataaacata aagattgcac gggggtgaca gtacgagtaa 841 cacctgaaaa acaaccgcaa attgcaggca tttatctttc aatgtctgtg gacactgtta 901 ttccacctgg ggaagaggca gttaattctg atatcgcctg cctctacaac aggccgacaa 961 tacacccatt tgcctacaga gtccacactc atcagttggg gcaggtcgta agtggattta 1021 gagtgagaca tggcaagtgg tctttaattg gtagacaaag cccacagctg ccacaggcat 1081 tttaccctgt agagcatcca gtagagatta gccctgggga tattatagca accaggtgtc 1141 tgttcactgg taaaggcagg acgtcagcaa catatattgg tggcacatct aacgatgaaa 1201 tgtgtaattt atacatcatg tattacatgg atgcggccca tgctacgtca tacatgacct 1261 gtgtacagac gggtgaacca aagttatttc aaaacatccc tgagattgca aatgttccca 1321 ttcctgtaag ccctgacatg atgatgatga tgggacatgg tcaccaccat acagaagctg 1381 agcctgagaa gaatacagga cttcagcagc ctaaacggga ggaggaagaa gtattagatc 1441 agggtctcat taccttaggg gatagcgcag tgtgatggag gaggacatga tccctatacc 1501 gttgaagggg atgacccaat cattttaaag aacgttcttt taaacatgag agaccacatc 1561 caggagacat aaatccacaa attgtataag ttgtgtgtat acatcaccct tttatgacaa 1621 agatccataa tataatacgt tatcactgac ccttctgcaa catccttaat ccaggatttg 1681 ctcactctcc attgctgtca tacagatgtt cacttatggg caacaaaata cttttctcct 1741 aattcaggtc cagtttttct cattgaagtg catctggctc aattgacaaa tctaaaattg 1801 atttaggaaa tcagcttttt ccccatcaaa ttgaagctgg cccaaaagtt actcttaaaa 1861 gaaggtgaca gtcaagtctc aacttttgcc cactgagtta gtgataccaa ttctgtgtag 1921 gggaattaag tagcttttct taaagggttg gttcaccttt aagtcaactt ttagtatgtt 1981 atagaatgac taattcataa ataaataaat aaaagcagct tttcaattgg tcttcattat 2041 ttattttgta tagttttttt attatttgtc tttttcatct gactttttcc agctttcaaa 2101 tgggggtcac tgaccccatc taaaaaaaca aatgctctgt aagactacaa atttattgtt 2161 actgctttta attagtaatg tttctattca ggccctcccc tattcatatt caagcctttt 2221 attccaatca gtgcatggtt gctagggtaa ttggtaccct agcaaccaga tcactaaaac 2281 tgcaaactgg agaactgctg aataaaaagc taaataacaa aaaaaaaaaa aaa //