LOCUS BC040668 3875 bp mRNA linear HUM 17-JUL-2006 DEFINITION Homo sapiens trafficking protein, kinesin binding 2, mRNA (cDNA clone MGC:42256 IMAGE:4814594), complete cds. ACCESSION BC040668 VERSION BC040668.2 KEYWORDS MGC. SOURCE Homo sapiens (human) ORGANISM Homo sapiens Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Hominidae; Homo. REFERENCE 1 (bases 1 to 3875) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3875) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (29-NOV-2002) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT On Aug 25, 2003 this sequence version replaced BC040668.1. Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Miklos Palkovits, M.D., Ph.D. cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki Toshiyuki and Piero Carninci (RIKEN) cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Genome Sequence Centre, BC Cancer Agency, Vancouver, BC, Canada info@bcgsc.bc.ca Martin Hirst, Thomas Zeng, Ryan Morin, Michelle Moksa, Johnson Pang, Diana Mah, Jing Wang, Kieth Fichter, Eric Chuah, Allen Delaney, Rob Kirkpatrick, Agnes Baross, Sarah Barber, Mabel Brown-John, Steve S. Chand, William Chow, Ryan Babakaiff, Dave Wong, Corey Matsuo, Jaclyn Beland, Susan Gibson, Luis delRio, Ruth Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao, Kim MacDonald, Mike R. Mayo, Josh Moran, Diana Palmquist, JR Santos, Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie Schein, Asim Siddiqui,Steven Jones, Rob Holt, Marco Marra. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 70 Row: n Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 13027379. FEATURES Location/Qualifiers source 1..3875 /db_xref="H-InvDB:HIT000052442" /organism="Homo sapiens" /mol_type="mRNA" /db_xref="taxon:9606" /clone="MGC:42256 IMAGE:4814594" /tissue_type="Brain, hippocampus" /clone_lib="NIH_MGC_95" /lab_host="DH10B" /note="Vector: pBluescriptR" gene 1..3875 /gene="TRAK2" /gene_synonym="CALS-C" /gene_synonym="GRIF-1" /gene_synonym="GRIF1" /gene_synonym="KIAA0549" /gene_synonym="OIP98" /db_xref="GeneID:66008" /db_xref="HGNC:HGNC:13206" /db_xref="MIM:607334" CDS 398..3142 /gene="TRAK2" /gene_synonym="CALS-C" /gene_synonym="GRIF-1" /gene_synonym="GRIF1" /gene_synonym="KIAA0549" /gene_synonym="OIP98" /codon_start=1 /product="trafficking protein, kinesin binding 2" /protein_id="AAH40668.1" /db_xref="GeneID:66008" /db_xref="HGNC:HGNC:13206" /db_xref="MIM:607334" /translation="MSQSQNAIFTSPTGEENLMNSNHRDSESITDVCSNEDLPEVELV SLLEEQLPQYRLKVDTLFLYENQDWTQSPHQRQHASDALSPVLAEETFRYMILGTDRV EQMTKTYNDIDMVTHLLAERDRDLELAARIGQALLKRNHILSEQNESLEEQLGQAFDQ VNQLQHELCKKDELLRIVSIASEESETDSSCSTPLRFNESFSLSQGLLQLEMLQEKLK ELEEENMALRSKACHIKTETVTYEEKEQQLVSDCVKELRETNAQMSRMTEELSGKSDE LVRYQEELSSLLSQIVDLQHKLKEHVIEKEELKLHLQASKDAQRQLTMELHELQDRNM ECLGMLHESQEEIKELRSRSGPTAHLYFSQSYGAFTGESLAAEIEGTMRKKLSLDEES SLFKQKAQQKRVFDTVRIANDTRGRSISFPALLPIPGSNRSSVIMTAKPFESGLQQTE DKSLLNQGSSSEEVAGSSQKMGQPGPSGDSDLATALHRLSLRRQNYLSEKQFFAEEWQ RKIQVLADQKEGVSGCVTPTESLASLCTTQSEITDLSSASCLRGFMPEKLQIVKPLEG SQTLYHWQQLAQPNLGTILDQRPGVITKGFTQLPGDAIYHISDLEEDEEEGITFQVQQ PLEVEEKLSTSKPVTGIFLPPITSAGGPVTVATASPGKCLSCTNSTFTFTTCRILHPS DITQVTPSSGFPSLSCGSSGSSSSNTAVNSPALSYRLSIGESITNRRDSTTTFSSTMS LAKLLQERGISAKVYHSPISENPLQPLPKSLAIPSTPPNSPSHSPCPSPLPFEPRVHL SENFLASRPAETFLQEMYGLRHSRNPPDVGQLKMNLVDRLKRLGIARVVKNPGAQENG RCQEAEIGPQKPDSAVYLNSGSSLLGGLRRNQSLPVIMGSFAAPVCTSSPKMGVLKED " BASE COUNT 1135 a 881 c 890 g 969 t ORIGIN 1 attgacccgg tgtcgccgca gaaccgaggt cgccgagtga tgatgttgtg aagtcgcccg 61 cctgtccctg ccacgcccgg gcggttgctg gcagtgggag cagcggcagc agcttcggct 121 gctgctttca ggctgccgct gcattagggg cttcctgagg aagcgcgggc ggacgacaga 181 ggatgccgaa ccactccagt catgactgtc caaagtatga taatcacatg agagtgctcg 241 ttgctacgga tgtcatttga ctcatcagag aaaatctgtc taaaagaaaa tatccatgtg 301 accaaatcca tttcattatt gaatggcttg atggatttcc tttactctga ttcataccaa 361 agctgtcctt ctcaaccaaa gcaagaaagg atcctgcatg agtcaatccc agaatgcaat 421 ttttacatca ccaacaggtg aagaaaacct catgaatagc aatcacagag actcggagag 481 catcactgat gtctgctcca atgaggatct ccctgaagtt gagctggtga gtctgctaga 541 agaacaacta ccacagtata ggctaaaagt agacactctc tttctatatg aaaatcaaga 601 ctggactcag tctccacacc agcggcagca tgcatctgat gctctctctc cagtccttgc 661 tgaagagact ttccgttaca tgattctagg cacagacagg gtggagcaga tgaccaaaac 721 ttacaatgac atcgacatgg ttacacatct cctggcagag agggatcgtg atctggaact 781 cgctgctcga attggacaag ctctcttaaa gcggaaccat atcttatctg agcagaacga 841 atccctggag gagcaattgg gacaagcctt tgatcaagtt aatcagctgc agcatgagct 901 atgcaagaaa gatgagttac ttcgaatcgt ctccattgct tctgaagaaa gtgaaactga 961 ttccagctgt tctacacctc ttcggttcaa tgagtccttt agcttatctc aagggttgct 1021 gcagttggaa atgctgcaag aaaagctcaa ggaactggaa gaagagaata tggctcttcg 1081 atccaaggct tgtcacataa agacagaaac tgttacctat gaagaaaagg aacaacagct 1141 tgtcagcgac tgtgttaaag aacttcgtga aacaaatgct cagatgtcca gaatgactga 1201 agaattgtca gggaagagtg atgagctggt tcgataccaa gaagagcttt cctctctttt 1261 gtcacagatt gtagaccttc agcataaact taaagaacat gtgattgaga aggaagaact 1321 aaaacttcac ctgcaagctt ccaaagatgc ccaacggcaa ctgacaatgg agctgcacga 1381 gttacaagac aggaatatgg agtgtctagg aatgttacat gaatcccaag aagaaataaa 1441 ggaacttcgt agtagatctg gccctactgc tcatctctac ttctcccaat catatggagc 1501 ttttactggg gaatctttgg cagctgagat tgaggggact atgcgtaaaa agctgagttt 1561 ggatgaggaa tcttctctct ttaaacaaaa agcccaacag aagcgggtat ttgataccgt 1621 caggattgcc aatgacacac ggggccgctc tatctcattc ccagctctgt tacccattcc 1681 aggctccaac cgttcaagtg tcatcatgac agcaaaacct tttgagtctg gtcttcagca 1741 aacagaggac aaatcactcc tgaaccaggg gagcagctca gaggaggttg cagggagctc 1801 ccagaagatg ggccaaccag gaccctcagg agatagtgat ttggctacag cactgcatcg 1861 ccttagcttg cgtcgacaaa actatttaag tgagaagcag ttctttgctg aagaatggca 1921 gcggaagatc caggttctgg cagaccagaa ggaaggagtt agtggctgtg tcaccccgac 1981 agagagcctt gcctctctct gcaccaccca gtcagagatc acagacctca gcagtgccag 2041 ttgccttcga ggttttatgc cagaaaaatt acaaattgtc aagccccttg aaggatcaca 2101 aactctgtat cactggcagc agcttgctca accaaacttg ggaaccatcc ttgatcaacg 2161 accaggtgtc attactaaag gctttaccca gttgcccggg gatgctattt atcacatctc 2221 agatttagaa gaggatgaag aggagggtat tacttttcag gttcagcaac ctcttgaagt 2281 ggaagagaaa ctttcaacat ccaagccagt aacagggatc ttcctgccac ccattacttc 2341 agcaggtgga ccagttacag ttgcaaccgc cagcccagga aagtgcctgt cgtgcacaaa 2401 ctcaacattc actttcacca cctgtagaat attacatccc tctgacatca ctcaggttac 2461 ccccagctct gggttccctt cattatcctg tggaagtagc ggtagcagtt catccaacac 2521 ggctgtgaat tctcctgcct tgtcctatag actcagcatt ggtgagtcca tcaccaaccg 2581 acgagattcc actacaacct tcagtagcac catgagcttg gccaaacttc tacaagagcg 2641 aggcatctct gccaaagtgt accacagccc aatttcagag aaccccctcc agcctctccc 2701 taaatccctg gctatccctt ccacaccacc aaattcacca tctcactcac cttgcccttc 2761 tcctttaccc tttgagcctc gagtgcatct ctctgaaaat tttttggcct ctcgaccagc 2821 tgagacattc ctccaggaga tgtatggctt gagacactcc cggaaccctc ctgatgttgg 2881 ccagttgaag atgaacttag tggacaggct gaagagactg gggatagcca gagtggtcaa 2941 gaaccctggt gcccaagaga atggaagatg ccaggaggca gaaattggtc ctcaaaaacc 3001 agattctgct gtttatttaa attcaggtag cagtttatta ggtggactaa ggaggaatca 3061 gagtcttcca gtcataatgg gtagctttgc tgccccagtt tgcacatcct cacccaaaat 3121 gggtgtcctg aaggaggact gaggttcagc agttaactga cctcttatac aagttagcac 3181 atgaaggata gatatgcact gaaacatgtg gtctggtctg acttgagaga aaaggaatgt 3241 tgcacaaggg ttgtgaatgt gaaaggggga atggaggaat ggaaataaaa ttgggatgag 3301 ccctaatgga ggaagtcggg caaattgaaa gtataaatga atgggccatg agtgttcaga 3361 gggagaaaag aaaggtttaa tatactcctt cagttgagtt ttcttgtctt gaacataaaa 3421 agtgagtaca aataaattca gtaatactaa aacatacaga gatactgaac ttgctggcac 3481 atttacttct ggtaagcata aagcagagag aacccaggtt agaaggatgg gaagagaaaa 3541 ggagcagttt tattgcttat agaaagccgt tctgaggggt tggtggggta agctcagtct 3601 attactgaga caatagtgag atggcttata tgtttcccct gttaatatct ggttaaatta 3661 tgtatccatc aaatggtatg ctcgcagcat tagcaaaatt aggagtttca tctttttcat 3721 tgaatcacag gtggagactc ctattttcct ttctgttttc aggcctttga gcccctggga 3781 gcccaaatac cactcaatta ttttgtattt atgattaata aaagttcatt ttttaaattt 3841 gtatttttat acaacctcca aaaaaaaaaa aaaaa //