LOCUS BC037733 3460 bp mRNA linear HUM 17-JUL-2006
DEFINITION Homo sapiens solute carrier family 40 (iron-regulated transporter),
member 1, mRNA (cDNA clone MGC:26152 IMAGE:4823308), complete cds.
ACCESSION BC037733
VERSION BC037733.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3460)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3460)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (13-SEP-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Miklos Palkovits, M.D., Ph.D.
cDNA Library Preparation: Michael J. Brownstein (NHGRI) & Shiraki
Toshiyuki and Piero Carninci (RIKEN)
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 33 Row: f Column: 7
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 31543639.
FEATURES Location/Qualifiers
source 1..3460
/db_xref="H-InvDB:HIT000051946"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:26152 IMAGE:4823308"
/tissue_type="Testis"
/clone_lib="NIH_MGC_97"
/lab_host="DH10B"
/note="Vector: pBluescriptR"
gene 1..3460
/gene="SLC40A1"
/gene_synonym="FPN1"
/gene_synonym="HFE4"
/gene_synonym="IREG1"
/gene_synonym="MST079"
/gene_synonym="MSTP079"
/gene_synonym="MTP1"
/db_xref="GeneID:30061"
/db_xref="HGNC:HGNC:10909"
/db_xref="MIM:604653"
CDS 431..2146
/gene="SLC40A1"
/gene_synonym="FPN1"
/gene_synonym="HFE4"
/gene_synonym="IREG1"
/gene_synonym="MST079"
/gene_synonym="MSTP079"
/gene_synonym="MTP1"
/codon_start=1
/product="solute carrier family 40 (iron-regulated
transporter), member 1"
/protein_id="AAH37733.1"
/db_xref="GeneID:30061"
/db_xref="HGNC:HGNC:10909"
/db_xref="MIM:604653"
/translation="MTRAGDHNRQRGCCGSLADYLTSAKFLLYLGHSLSTWGDRMWHF
AVSVFLVELYGNSLLLTAVYGLVVAGSVLVLGAIIGDWVDKNARLKVAQTSLVVQNVS
VILCGIILMMVFLHKHELLTMYHGWVLTSCYILIITIANIANLASTATAITIQRDWIV
VVAGEDRSKLANMNATIRRIDQLTNILAPMAVGQIMTFGSPVIGCGFISGWNLVSMCV
EYVLLWKVYQKTPALAVKAGLKEEETELKQLNLHKDTEPKPLEGTHLMGVKDSNIHEL
EHEQEPTCASQMAEPFRTFRDGWVSYYNQPVFLAGMGLAFLYMTVLGFDCITTGYAYT
QGLSGSILSILMGASAITGIMGTVAFTWLRRKCGLVRTGLISGLAQLSCLILCVISVF
MPGSPLDLSVSPFEDIRSRFIQGESITPTKIPEITTEIYMSNGSNSANIVPETSPESV
PIISVSLLFAGVIAARIGLWSFDLTVTQLLQENVIESERGIINGVQNSMNYLLDLLHF
IMVILAPNPEAFGLLVLISVSFVAMGHIMYFRFAQNTLGNKLFACGPDAKEVRKENQA
NTSVV"
BASE COUNT 958 a 708 c 752 g 1042 t
ORIGIN
1 agcgggacgc ccgggcggcc ctgaagggga cggggcggcc ccagtcggag gtcgcaggga
61 gctccgcccc cgactcggta taagagctgg gcccggccca cggcggcggc ggcggcggcg
121 gagagagctg gctcagggcg tccgctaggc tcggacgacc tgctgagcct cccaaaccgc
181 ttccataagg ctttgccttt ccaacttcag ctacagtgtt agctaagttt ggaaagaagg
241 aaaaaagaaa atccctgggc cccttttctt ttgttctttg ccaaagtcgt cgttgtagtc
301 tttttgccca aggctgttgt gtttttagag gtcctatctc cagttccttg cactcctgtt
361 aacaagcacc tcagcgagag cagcagcagc gatagcagcc gcagaagagc cagcggggtc
421 gcgtagtgtc atgaccaggg cgggagatca caaccgccag agaggatgct gtggatcctt
481 ggccgactac ctgacctctg caaaattcct tctctacctt ggtcattctc tctctacttg
541 gggagatcgg atgtggcact ttgcggtgtc tgtgtttctg gtagagctct atggaaacag
601 cctccttttg acagcagtct acgggctggt ggtggcaggg tctgttctgg tcctgggagc
661 catcatcggt gactgggtgg acaagaatgc tagacttaaa gtggcccaga cctcgctggt
721 ggtacagaat gtttcagtca tcctgtgtgg aatcatcctg atgatggttt tcttacataa
781 acatgagctt ctgaccatgt accatggatg ggttctcact tcctgctata tcctgatcat
841 cactattgca aatattgcaa atttggccag tactgctact gcaatcacaa tccaaaggga
901 ttggattgtt gttgttgcag gagaagacag aagcaaacta gcaaatatga atgccacaat
961 acgaaggatt gaccagttaa ccaacatctt agcccccatg gctgttggcc agattatgac
1021 atttggctcc ccagtcatcg gctgtggctt tatttcggga tggaacttgg tatccatgtg
1081 cgtggagtac gttctgctct ggaaggttta ccagaaaacc ccagctctag ctgtgaaagc
1141 tggtcttaaa gaagaggaaa ctgaattgaa acagctgaat ttacacaaag atactgagcc
1201 aaaacccctg gagggaactc atctaatggg tgtgaaagac tctaacatcc atgagcttga
1261 acatgagcaa gagcctactt gtgcctccca gatggctgag cccttccgta ccttccgaga
1321 tggatgggtc tcctactaca accagcctgt gtttctggct ggcatgggtc ttgctttcct
1381 ttatatgact gtcctgggct ttgactgcat caccacaggg tacgcctaca ctcagggact
1441 gagtggttcc atcctcagta ttttgatggg agcatcagct ataactggaa taatgggaac
1501 tgtagctttt acttggctac gtcgaaaatg tggtttggtt cggacaggtc tgatctcagg
1561 attggcacag ctttcctgtt tgatcttgtg tgtgatctct gtattcatgc ctggaagccc
1621 cctggacttg tccgtttctc cttttgaaga tatccgatca aggttcattc aaggagagtc
1681 aattacacct accaagatac ctgaaattac aactgaaata tacatgtcta atgggtctaa
1741 ttctgctaat attgtcccgg agacaagtcc tgaatctgtg cccataatct ctgtcagtct
1801 gctgtttgca ggcgtcattg ctgctagaat cggtctttgg tcctttgatt taactgtgac
1861 acagttgctg caagaaaatg taattgaatc tgaaagaggc attataaatg gtgtacagaa
1921 ctccatgaac tatcttcttg atcttctgca tttcatcatg gtcatcctgg ctccaaatcc
1981 tgaagctttt ggcttgctcg tattgatttc agtctccttt gtggcaatgg gccacattat
2041 gtatttccga tttgcccaaa atactctggg aaacaagctc tttgcttgcg gtcctgatgc
2101 aaaagaagtt aggaaggaaa atcaagcaaa tacatctgtt gtttgagaca gtttaactgt
2161 tgctatcctg ttactagatt atatagagca catgtgctta ttttgtactg cagaattcca
2221 ataaatggct gggtgttttg ctctgttttt accacagctg tgccttgaga actaaaagct
2281 gtttaggaaa cctaagtcag cagaaattaa ctgattaatt tcccttatgt tgaggcatgg
2341 aaaaaaaatt ggaaaagaaa aactcagttt aaatacggag actataatga taacactgaa
2401 ttcccctatt tctcatgagt agatacaatc ttacgtaaaa gagtggttag tcacgtgaat
2461 tcagttatca tttgacagat tcttatctgt actagaattc agatatgtca gttttctgca
2521 aaactcactc ttgttcaaga ctagctaatt tatttttttg catcttagtt atttttaaaa
2581 acaaattctt caagtatgaa gactaaattt tgataactaa tattatcctt attgatccta
2641 ttgatcttaa ggtatttaca tgtatgtgga aaaacaaaac acttaactag aattctctaa
2701 taaggtttat ggtttagctt aaagagcacc tttgtatttt tattatcaga tggggcaaca
2761 tattgtatga agcatatgta gcacttcaca gcatggttat catgtaagct gcaggtagaa
2821 gcaaagctgt aaagtagatt tatcacacaa tgactgcata cagacttcaa atatgtcaat
2881 agtttggtca tagaacctag aagccaaaag ccacacagaa gggcaagaat cccaatttaa
2941 ctcatgttat catcattagt gatctgtgtt gtagaacatg agggtgtaag ccttcagcct
3001 ggcaagttac atgtagaaag cccacacttg tgaaggtttt gttttacaaa tcacttgatt
3061 taacacactc aggtagaata tttttatttt tactgtttta tacccagaag ttatttctac
3121 attgttctac agcaagaata ttcataaaag tatccctttc aaatgccttt gagaagaata
3181 gaagaaaaaa agtttgtata tattttaaaa aattgtttta aaagtcagtt tgcaacatgt
3241 ctgtaccaag atggtacttt gccttaaccg tttatatgca ctttcatgga gactgcaata
3301 cgttgctatg agcactttct ttatccttgg agtttaatcc tttgcttcat ctttctacag
3361 tatgacataa tgatttgcta tgttgtaaaa tctttgtaaa aaatttctat ataaaaatat
3421 tttgaaaatc ttaaaaaaaa aaaaaaaaaa aaaaaaaaaa
//