LOCUS BC032371 2104 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens aldehyde dehydrogenase 6 family, member A1, mRNA (cDNA
clone MGC:40271 IMAGE:5163797), complete cds.
ACCESSION BC032371
VERSION BC032371.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2104)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2104)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (06-JUN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 64 Row: d Column: 3
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 25777737.
FEATURES Location/Qualifiers
source 1..2104
/db_xref="H-InvDB:HIT000041514"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:40271 IMAGE:5163797"
/tissue_type="Brain, adult medulla"
/clone_lib="NIH_MGC_119"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..2104
/gene="ALDH6A1"
/gene_synonym="MGC40271"
/gene_synonym="MMSADHA"
/db_xref="GeneID:4329"
/db_xref="HGNC:HGNC:7179"
/db_xref="MIM:603178"
CDS 100..1707
/gene="ALDH6A1"
/gene_synonym="MGC40271"
/gene_synonym="MMSADHA"
/codon_start=1
/product="aldehyde dehydrogenase 6 family, member A1"
/protein_id="AAH32371.1"
/db_xref="GeneID:4329"
/db_xref="HGNC:HGNC:7179"
/db_xref="MIM:603178"
/translation="MAALLAAAAVRARILQVSSKVKSSPTWYSASSFSSSVPTVKLFI
GGKFVESKSDKWIDIHNPATNEVIGRVPQATKAEMDAAIASCKRAFPAWADTSVLSRQ
QVLLRYQQLIKENLKEIAKLITLEQGKTLADAEGDVFRGLQVVEHACSVTSLMMGETM
PSITKDMDLYSYRLPLGVCAGIAPFNFPAMIPLWMFPMAMVCGNTFLMKPSERVPGAT
MLLAKLLQDSGAPDGTLNIIHGQHEAVNFICDHPDIKAISFVGSNKAGEYIFERGSRH
GKRVQANMGAKNHGVVMPDANKENTLNQLVGAAFGAAGQRCMALSTAVLVGEAKKWLP
ELVEHAKNLRVNAGDQPGADLGPLITPQAKERVCNLIDSGTKEGASILLDGRKIKVKG
YENGNFVGPTIISNVKPNMTCYKEEIFGPVLVVLETETLDEAIQIVNNNPYGNGTAIF
TTNGATARKYAHLVDVGQVGVNVPIPVPLPMFSFTGSRSSFRGDTNFYGKQGIQFYTQ
LKTITSQWKEEDATLSSPAVVMPTMGR"
BASE COUNT 646 a 465 c 484 g 509 t
ORIGIN
1 ccaatgagga agcctggcag gatggagggc gaggcctggc agctgtagtg cttctgggca
61 gtagaggcgc ggggtgcgga gctagggcgg ccgagagcca tggcggcgct attggcggcg
121 gcggcagtgc gagcccggat cctgcaggtt tcttccaagg tgaaatccag tcccacctgg
181 tattcagcat cttccttctc ttcttcagtg ccaactgtaa agctcttcat tggtgggaaa
241 ttcgttgaat ccaaaagtga caaatggatc gatatccaca acccagccac caatgaggtc
301 attggtcggg tccctcaggc caccaaggca gaaatggatg cagccattgc ttcctgcaaa
361 cgtgcttttc ctgcatgggc agacacttca gtattaagcc gccagcaggt cttgctccgc
421 tatcaacaac ttattaaaga aaacttgaaa gaaattgcca agttaatcac attggaacaa
481 gggaagaccc tagctgatgc tgaaggagat gtatttcgag gccttcaggt ggttgagcat
541 gcctgtagtg tgacatccct catgatggga gagaccatgc catccatcac caaagacatg
601 gacctttatt cctaccgtct gcctctggga gtgtgtgcag gcattgctcc attcaatttt
661 cctgccatga tccccctttg gatgtttccc atggccatgg tgtgtggaaa taccttccta
721 atgaaaccat ctgagcgagt ccctggagca actatgcttc ttgctaagtt gctccaggat
781 tctggtgccc ctgatggaac attaaacatc atccatggac agcatgaagc tgtaaatttt
841 atttgcgatc atccggacat caaagcaatc agctttgtgg gatccaacaa ggcaggagag
901 tatatcttcg agagaggatc aagacatggc aagagggttc aagccaatat gggagccaag
961 aaccatgggg tagtcatgcc agatgccaat aaggaaaata ccctgaacca gctggttggg
1021 gcagcatttg gagctgctgg tcagcgctgc atggctcttt caacagcagt ccttgtggga
1081 gaagccaaga agtggctgcc agagctggtg gagcatgcca aaaacctgag agtcaatgca
1141 ggagatcagc ctggagctga tcttggccct ctgatcactc cccaggccaa agagcgagtc
1201 tgtaatctga ttgatagtgg aacaaaggag ggagcttcca tccttcttga tggacgaaaa
1261 attaaagtga aaggctatga aaatggcaac tttgttggac caaccatcat ctcgaatgtc
1321 aagccaaata tgacctgtta caaagaggag atttttggtc cagttcttgt ggttctggag
1381 acagaaacat tggatgaagc catccagatt gtaaataaca acccatatgg aaatggaact
1441 gccatcttca ccaccaatgg agccactgct cggaaatatg cccacttggt ggatgttgga
1501 caggtgggag tgaatgtccc cattccagtg cctttgccaa tgttctcatt caccggctct
1561 cgatcctcct tcaggggaga caccaatttc tatggcaaac agggcatcca attctacact
1621 cagttaaaga ccattacttc tcagtggaaa gaagaagatg ctactctttc ctcacctgct
1681 gttgtcatgc ctaccatggg ccgttagaaa caagtttgtt taagactgac tccatcctga
1741 gtaatctccc tttatttttg accagcttca tttgtcagct ttgctcagat cagatcgatg
1801 ggattggaat acattgtaac taaaatcttc ctcaggacta ttaacccctg caaagtttct
1861 atagggaact gcctagtgta acaatgaaac cagatttctc acttgctctt catacttcta
1921 ttttgaggta actgttgtaa ctatgaaatg cttatctgaa agtagtgctt aaacctgatt
1981 tctaaaaatt aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2041 aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
2101 aaaa
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