LOCUS BC027903 1997 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens leucine rich repeat containing 17, mRNA (cDNA clone
MGC:34451 IMAGE:5229061), complete cds.
ACCESSION BC027903
VERSION BC027903.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1997)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1997)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (08-APR-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Life Technologies, Inc.
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 49 Row: o Column: 24
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5031970.
FEATURES Location/Qualifiers
source 1..1997
/db_xref="H-InvDB:HIT000040344"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:34451 IMAGE:5229061"
/tissue_type="Pancreas, Spleen, adult pooled"
/clone_lib="NIH_MGC_120"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene 1..1997
/gene="LRRC17"
/gene_synonym="P37NB"
/db_xref="GeneID:10234"
/db_xref="HGNC:HGNC:16895"
CDS 268..1593
/gene="LRRC17"
/gene_synonym="P37NB"
/codon_start=1
/product="leucine rich repeat containing 17"
/protein_id="AAH27903.1"
/db_xref="GeneID:10234"
/db_xref="HGNC:HGNC:16895"
/translation="MRVVTIVILLCFCKAAELRKASPGSVRSRVNHGRAGGGRRGSNP
VKRYAPGLPCDVYTYLHEKYLDCQERKLVYVLPGWPQDLLHMLLARNKIRTLKNNMFS
KFKKLKSLDLQQNEISKIESEAFFGLNKLTTLLLQHNQIKVLTEEVFIYTPLLSYLRL
YDNPWHCTCEIETLISMLQIPRNRNLGNYAKCESPQEQKNKKLRQIKSEQLCNEEEKE
QLDPKPQVSGRPPVIKPEVDSTFCHNYVFPIQTLDCKRKELKKVPNNIPPDIVKLDLS
YNKINQLRPKEFEDVHELKKLNLSSNGIEFIDPAAFLGLTHLEELDLSNNSLQNFDYG
VLEDLYFLKLLWLRDNPWRCDYNIHYLYYWLKHHYNVHFNGLECKTPEEYKGWSVGKY
IRSYYEECPKDKLPAYPESFDQDTEDDEWEKKHRDHTAKKQSVIITIVG"
BASE COUNT 688 a 396 c 409 g 504 t
ORIGIN
1 tgaatgcagc ccattctctg gagaacttcc tcacacacca cagcaaagag aagactgaaa
61 gacaaacctg ggtgcagcca gagaggtcca gatagatgag cttgtggcat ccattcccca
121 agttcagcct agggactcca cgtaccccag ctgggtctca ttgttccaga actgcattag
181 ttaagattac ccagacttgg atttcaaagg aatactttca ttgttccgtc tgtaacacga
241 agtaattggg gccagctgga tgtcaggatg cgtgtggtta ccattgtaat cttgctctgc
301 ttttgcaaag cggctgagct gcgcaaagca agcccaggca gtgtgagaag ccgagtgaat
361 catggccggg cgggtggagg ccggagaggc tccaacccgg tcaaacgcta cgcaccaggc
421 ctcccgtgtg acgtgtacac atatctccat gagaaatact tagattgtca agaaagaaaa
481 ttagtttatg tgctgcctgg ttggcctcag gatttgctgc acatgctgct agcaagaaac
541 aagatccgca cattgaagaa caacatgttt tccaagttta aaaagctgaa aagcctggat
601 ctgcagcaga atgagatctc taaaattgag agtgaggcgt tctttggttt aaacaaactc
661 accaccctct tactgcagca caaccagatc aaagtcttga cggaggaagt gttcatttac
721 acacctctct tgagctacct gcgtctttat gacaacccct ggcactgtac ttgtgagata
781 gaaacgctta tttcaatgtt gcagattccc aggaaccgga atttggggaa ctacgccaag
841 tgtgaaagtc cacaagaaca aaaaaataaa aaactgcggc agataaaatc tgaacagttg
901 tgtaatgaag aagaaaagga acaattggac ccgaaacccc aagtgtcagg gagaccccca
961 gtcatcaagc ctgaggtgga ctcaactttt tgccacaatt atgtgtttcc catacaaaca
1021 ctggactgca aaaggaaaga gttgaaaaaa gtgccaaaca acatccctcc agatattgtt
1081 aaacttgact tgtcatacaa taaaatcaac caacttcgac ccaaggaatt tgaagatgtt
1141 catgagctga agaaattaaa cctcagcagc aatggcattg aattcatcga tcctgccgct
1201 tttttagggc tcacacattt agaagaatta gatttatcaa acaacagtct gcaaaacttt
1261 gactatggcg tattagaaga cttgtatttt ttgaaactct tgtggctcag agataaccct
1321 tggagatgtg actacaacat tcactacctc tactactggt taaagcacca ctacaatgtc
1381 cattttaatg gcctggaatg caaaacgcct gaagaataca aaggatggtc tgtgggaaaa
1441 tatattagaa gttactatga agaatgcccc aaagacaagt taccagcata tcctgagtca
1501 tttgaccaag acacagaaga tgatgaatgg gaaaaaaaac atagagatca caccgcaaag
1561 aagcaaagcg taataattac tatagtagga taaggtagaa attgttctga ttgtaattag
1621 ttttgtattt tctatactgg tgttagaaaa catatgttta catttgatta actgtgttgc
1681 ctatttatgc agggtaatcc agctaaagga agctttcttt aattataagt attattgtga
1741 ctattatagt aatcaagaga atgctatcat cctgcttgcc tgtccatttg tggaacagca
1801 tctggtgata tgcaattcca cactggtaac ctgcagcagt tgggtcctaa tgatggcatt
1861 agactttcat aatgtcctgt ataaatgttt ttactgcttt tagaaaataa agaaaaaaaa
1921 cttggttcaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa
1981 aaaaaaaaaa aaaaaaa
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