LOCUS BC020683 769 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens apolipoprotein M, mRNA (cDNA clone MGC:22400
IMAGE:4733993), complete cds.
ACCESSION BC020683
VERSION BC020683.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 769)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 769)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (03-JAN-2002) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: CLONTECH
cDNA Library Preparation: CLONTECH Laboratories, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Sequencing Group at the Stanford Human Genome
Center, Stanford University School of Medicine, Stanford, CA 94305
Web site: http://www-shgc.stanford.edu
Contact: (Dickson, Mark) mcd@paxil.stanford.edu
Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers,
R. M.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 37 Row: i Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 22091451.
FEATURES Location/Qualifiers
source 1..769
/db_xref="H-InvDB:HIT000038893_10"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22400 IMAGE:4733993"
/tissue_type="Liver"
/clone_lib="NIH_MGC_76"
/lab_host="DH10B"
/note="Vector: pDNR-LIB"
gene 1..769
/gene="APOM"
/gene_synonym="G3a"
/gene_synonym="HSPC336"
/gene_synonym="MGC22400"
/gene_synonym="NG20"
/db_xref="GeneID:55937"
/db_xref="HGNC:HGNC:13916"
/db_xref="MIM:606907"
CDS 53..619
/gene="APOM"
/gene_synonym="G3a"
/gene_synonym="HSPC336"
/gene_synonym="MGC22400"
/gene_synonym="NG20"
/codon_start=1
/product="apolipoprotein M"
/protein_id="AAH20683.1"
/db_xref="GeneID:55937"
/db_xref="HGNC:HGNC:13916"
/db_xref="MIM:606907"
/translation="MFHQIWAALLYFYGIILNSIYQCPEHSQLTTLGVDGKEFPEVHL
GQWYFIAGAAPTKEELATFDPVDNIVFNMAAGSAPMQLHLRATIRMKDGLCVPRKWIY
HLTEGSTDLRTEGRPDMKTELFSSSCPGGIMLNETGQGYQRFLLYNRSPHPPEKCVEE
FKSLTSCLDSKAFLLTPRNQEACELSNN"
BASE COUNT 211 a 203 c 181 g 174 t
ORIGIN
1 aggggagaga gcagttaagg cacacagagc accagctccc tcctgcctga agatgttcca
61 ccaaatttgg gcagctctgc tctacttcta tggtattatc cttaactcca tctaccagtg
121 ccctgagcac agtcaactga caactctggg cgtggatggg aaggagttcc cagaggtcca
181 cttgggccag tggtacttta tcgcaggggc agctcccacc aaggaggagt tggcaacttt
241 tgaccctgtg gacaacattg tcttcaatat ggctgctggc tctgccccga tgcagctcca
301 ccttcgtgct accatccgca tgaaagatgg gctctgtgtg ccccggaaat ggatctacca
361 cctgactgaa gggagcacag atctcagaac tgaaggccgc cctgacatga agactgagct
421 cttttccagc tcatgcccag gtggaatcat gctgaatgag acaggccagg gttaccagcg
481 ctttctcctc tacaatcgct caccacatcc tcccgaaaag tgtgtggagg aattcaagtc
541 cctgacttcc tgcctggact ccaaagcctt cttattgact cctaggaatc aagaggcctg
601 tgagctgtcc aataactgac ctgtaacttc atgtaagtcc ccagatgggt acaatgggag
661 ctgagttgtt ggagggagaa gctggagact tccagctcca gctcccactc aagataataa
721 agataatttt tcaatcctca aaaaaaaaaa aaaaaaaaaa aaaaaaaaa
//