LOCUS BC019109 1775 bp mRNA linear HUM 15-JUL-2006
DEFINITION Homo sapiens KH domain containing, RNA binding, signal transduction
associated 1, mRNA (cDNA clone MGC:29538 IMAGE:5094155), complete
cds.
ACCESSION BC019109
VERSION BC019109.2
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1775)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1775)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (07-DEC-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC019109.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: Louis M. Staudt, M.D., Ph.D.
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: National Institutes of Health Intramural
Sequencing Center (NISC),
Gaithersburg, Maryland;
Web site: http://www.nisc.nih.gov/
Contact: nisc_mgc@nhgri.nih.gov
Akhter,N., Ayele,K., Beckstrom-Sternberg,S.M., Benjamin,B.,
Blakesley,R.W., Bouffard,G.G., Breen,K., Brinkley,C., Brooks,S.,
Dietrich,N.L., Granite,S., Guan,X., Gupta,J., Haghighi,P.,
Hansen,N., Ho,S.-L., Karlins,E., Kwong,P., Laric,P., Legaspi,R.,
Maduro,Q.L., Masiello,C., Maskeri,B., Mastrian,S.D.,McCloskey,J.C.,
McDowell,J., Pearson,R., Stantripop,S., Thomas,P.J., Touchman,J.W.,
Tsurgeon,C., Vogt,J.L., Walker,M.A., Wetherby,K.D., Wiggins,L.,
Young,A., Zhang,L.-H. and Green,E.D.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 39 Row: p Column: 12
This clone was selected for full length sequencing because it
passed the following selection criteria: matched mRNA gi: 5730026.
FEATURES Location/Qualifiers
source 1..1775
/db_xref="H-InvDB:HIT000038558"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:29538 IMAGE:5094155"
/tissue_type="Lymph, Burkitt lymphoma"
/clone_lib="NIH_MGC_8"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..1775
/gene="KHDRBS1"
/gene_synonym="p62"
/gene_synonym="Sam68"
/db_xref="GeneID:10657"
/db_xref="HGNC:HGNC:18116"
/db_xref="MIM:602489"
CDS 115..1446
/gene="KHDRBS1"
/gene_synonym="p62"
/gene_synonym="Sam68"
/codon_start=1
/product="KH domain containing, RNA binding, signal
transduction associated 1"
/protein_id="AAH19109.1"
/db_xref="GeneID:10657"
/db_xref="HGNC:HGNC:18116"
/db_xref="MIM:602489"
/translation="MQRRDDPAARMSRSSGRSGSMDPSGAHPSVRQTPSRQPPLPHRS
RGGGGGSRGGARASPATQPPPLLPPSATGPDATVGGPAPTPLLPPSATASVKMEPENK
YLPELMAEKDSLDPSFTHAMQLLTAEIEKIQKGDSKKDDEENYLDLFSHKNMKLKERV
LIPVKQYPKFNFVGKILGPQGNTIKRLQEETGAKISVLGKGSMRDKAKEEELRKGGDP
KYAHLNMDLHVFIEVFGPPCEAYALMAHAMEEVKKFLVPDMMDDICQEQFLELSYLNG
VPEPSRGRGVPVRGRGAAPPPPPVPRGRGVGPPRGALVRGTPVRGAITRGATVTRGVP
PPPTVRGAPAPRARTAGIQRIPLPPPPAPETYEEYGYDDTYAEQSYEGYEGYYSQSQG
DSEYYDYGHGEVQDSYEAYGQDDWNGTRPSLKAPPARPVKGAYREHPYGRY"
BASE COUNT 447 a 469 c 469 g 390 t
ORIGIN
1 ctcgggtcgg cttcggtcgc taccgctccc gctctgccac ccccgccaac cgccgctcgg
61 gcctccgtcg ctgccgcgtc gctttctcgc tccttggatc gcacatcctc ccagatgcag
121 cgccgggacg accccgccgc gcgcatgagc cggtcttcgg gccgtagcgg ctccatggac
181 ccctccggtg cccacccctc ggtgcgtcag acgccgtctc ggcagccgcc gctgcctcac
241 cggtcccggg gaggcggagg gggatcccgc gggggcgccc gggcctcgcc cgccacgcag
301 ccgccaccgc tgctgccgcc ctcggccacg ggtcccgacg cgacagtggg cgggccagcg
361 ccgaccccgc tgctgccccc ctcggccaca gcctcggtca agatggagcc agagaacaag
421 tacctgcccg aactcatggc cgagaaggac tcgctcgacc cgtccttcac tcacgccatg
481 cagctgctga cggcagaaat tgagaagatt cagaaaggag actcaaaaaa ggatgatgag
541 gagaattact tggatttatt ttctcataag aacatgaaac tgaaagagcg agtgctgata
601 cctgtcaagc agtatcccaa gttcaatttt gtggggaaga ttcttggacc acaagggaat
661 acaatcaaaa gactgcagga agagactggt gcaaagatct ctgtattggg aaagggctca
721 atgagagaca aagccaagga ggaagagctg cgcaaaggtg gagaccccaa atatgcccac
781 ttgaatatgg atctgcatgt cttcattgaa gtctttggac ccccatgtga ggcttatgct
841 cttatggccc atgccatgga ggaagtcaag aaatttctag taccggatat gatggatgat
901 atctgtcagg agcaatttct agagctgtcc tacttgaatg gagtacctga accctctcgt
961 ggacgtgggg tgccagtgag aggccgggga gctgcacctc ctccaccacc tgttcccagg
1021 ggccgtggtg ttggaccacc tcggggggct ttggtacgtg gtacaccagt aaggggagcc
1081 atcaccagag gtgccactgt gactcgaggc gtgccacccc cacctactgt gaggggtgct
1141 ccagcaccaa gagcacggac agcgggcatc cagaggatac ctttgcctcc acctcctgca
1201 ccagaaacat atgaagaata tggatatgat gatacatacg cagaacaaag ttacgaaggc
1261 tacgaaggct attacagcca gagtcaaggg gactcagaat attatgacta tggacatggg
1321 gaggttcaag attcttatga agcttatggc caggacgact ggaatgggac caggccgtcg
1381 ctgaaggccc ctcctgctag gccagtgaag ggagcataca gagagcaccc atatggacgt
1441 tattaaaaac aaacatgagg ggaaaatatc agttatgagc aaagttgtta ctgatttctt
1501 gtatctccca ggattcctgt tgctttaccc acaacagaca agtaattgtc taagtgtttt
1561 tcttcgtggt ccccttcttc tccccacctt attccattct taactctgca ttctggcttc
1621 tgtatgtagt attttaaaat gagttaaaat agatttagga atattgaatt aattttttaa
1681 gtgtgtagat gcttttttct ttgttgttta aatataaaca gaagtgtacc ttttataata
1741 aaaaaaagaa gttgagtaaa aaaaaaaaaa aaaaa
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