LOCUS BC018468 1708 bp mRNA linear ROD 14-SEP-2006 DEFINITION Mus musculus RIKEN cDNA 4933407N01 gene, mRNA (cDNA clone MGC:27955 IMAGE:3591901), complete cds. ACCESSION BC018468 VERSION BC018468.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1708) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1708) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (03-DEC-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Gilbert Smith, Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 35 Row: l Column: 9 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31981197. FEATURES Location/Qualifiers source 1..1708 /organism="Mus musculus" /mol_type="mRNA" /strain="Czech II" /db_xref="taxon:10090" /clone="MGC:27955 IMAGE:3591901" /tissue_type="Mammary tumor metastatized to lung. Tumor arose spontaneously from a senescent normal mammary (clonal) outgrowth infected with the virus MMTV." /clone_lib="NCI_CGAP_Lu29" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1708 /gene="4933407N01Rik" /gene_synonym="RP23-20N14.5" /db_xref="GeneID:66753" /db_xref="MGI:MGI:1914003" CDS 67..1518 /gene="4933407N01Rik" /gene_synonym="RP23-20N14.5" /codon_start=1 /product="RIKEN cDNA 4933407N01 gene" /protein_id="AAH18468.1" /db_xref="GeneID:66753" /db_xref="MGI:MGI:1914003" /translation="MEEGDGGLRSLVPGGPLLLVLYGLLEASGGGRALPQLSDDIPFR VNWPGTEFSLPTTGVLYKEDNYIIMTTAHKEKYKCILPLVTSGDEEEEKDYKGPNPRE LLEPLFKQSSCSYRIESYWTYEVCHGKHIRQYHEEKETGQKVNIHEYYLGNMLAKNLL YEKEREAKENEKSNEIPTKNIEGQMTPYYPVGMGNGTPCSLKQNRPRSSTVMYICHPE SKHEILSVAEVTTCEYEVVILTPLLCSHPKYKFRASPVNDIFCQSLPGSPFKPLTLRQ LEQQEEILRVPFRRNKEEDLPSAKEERFPAIHKPIAVGSQPVLTVGTTHISKLTDDQL IKEFLSGSYCFHGGVGWWKYEFCYGKHVHQYHEDKDNGKTSVVVGTWNQEEHVEWAKK NTARAYHLQDDGTQTVRMVSHFYGNGDICDITDKPRQVTVKLKCKESDSPHAVTVYML EPHSCQYILGVESPVICKILDTADENGLLSLPN" BASE COUNT 545 a 356 c 380 g 427 t ORIGIN 1 tcctcctccc ctcctcctgt tctcctccgg tagaggaggt tgtgaccgtg gctggaggac 61 gcggcaatgg aggaaggaga cggcggcttg cggagcctgg tccccggagg gccactgttg 121 ctggttctgt acggtctcct ggaggcgtcc ggcggcggcc gagcgctgcc ccagctcagc 181 gacgacatcc ccttccgagt caactggcct ggtaccgagt tctctctgcc tacaactgga 241 gttttgtata aagaagataa ttacatcatc atgacaactg ctcataaaga aaaatacaaa 301 tgtatacttc cacttgtgac aagtggggat gaggaagaag aaaaggatta caaaggcccc 361 aatccaagag agcttttgga accactattt aaacaaagca gttgttccta cagaattgaa 421 tcttactgga cttatgaggt ctgtcatggg aaacatattc gacagtacca tgaagaaaaa 481 gaaactggcc aaaaagtaaa tattcatgaa tactaccttg ggaatatgtt ggctaagaat 541 cttctgtatg aaaaagaacg agaagcaaaa gaaaatgaaa agtcaaatga gattcccact 601 aaaaacattg aaggtcagat gacaccctac tatcctgttg gaatgggaaa tggtacacct 661 tgtagtctga aacaaaatcg acccagatca agtactgtga tgtacatatg ccatcctgaa 721 tctaagcatg agatcctttc agtagctgaa gttacaactt gtgaatatga agttgtcatt 781 ttgacaccac tcttgtgcag tcatcctaaa tacaagttca gagcctctcc tgtgaatgac 841 atattctgtc aatcactgcc gggctctcca tttaaacccc tcacactaag acagttggag 901 cagcaggaag agatactgag agtgccattc aggagaaata aagaggaaga tttgccatct 961 gctaaggaag agagatttcc agccatccac aaacctattg ctgttggctc tcagccagtg 1021 ctcactgttg gaacaaccca catttccaag ctgacagatg accagctcat caaggagttc 1081 ctaagtggct cttactgctt tcatgggggt gttggttggt ggaaatatga attctgctat 1141 ggcaaacatg tacatcaata tcacgaggac aaagataatg gaaaaacttc tgtagttgtg 1201 gggacatgga accaagaaga gcatgttgag tgggctaaga aaaatactgc tagagcgtat 1261 catcttcaag acgatggcac ccagacagtc aggatggtgt cacattttta tggaaatggg 1321 gatatttgtg atataactga caaacccaga caagtgactg taaaactaaa gtgtaaagaa 1381 tcagactctc ctcatgctgt cactgtgtat atgctagagc ctcactcgtg ccagtatatt 1441 cttggggttg aatctccagt aatctgtaaa attctagata cagctgatga aaatggactt 1501 ctttctctcc ccaattaaaa gatattaaag ttgaaagaaa gaaagatgat tgaaaatcat 1561 cactttctcc tgaccacatc tctttgtaga gtctcaccat tggaccttgt ctgtagtatc 1621 acaaaaagga ctggcaacca cactgtgaaa ttcacgtgta tataagagat tacagataaa 1681 cttgtaaggc agaaaaaaaa aaaaaaaa //