LOCUS BC016639 2279 bp mRNA linear HUM 02-MAR-2004
DEFINITION Homo sapiens amine oxidase (flavin containing) domain 2, mRNA (cDNA
clone IMAGE:3917412), partial cds.
ACCESSION BC016639
VERSION BC016639.1
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 2279)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 2279)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Life Technologies, Inc.
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Baylor College of Medicine Human Genome
Sequencing Center
Center code: BCM-HGSC
Web site: http://www.hgsc.bcm.tmc.edu/cdna/
Contact: amg@bcm.tmc.edu
Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H.,
Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati,
A.N., Gibbs, R.A.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAK Plate: 26 Row: a Column: 3.
FEATURES Location/Qualifiers
source 1..2279
/db_xref="H-InvDB:HIT000089016"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3917412"
/tissue_type="Skin, melanotic melanoma."
/clone_lib="NIH_MGC_72"
/lab_host="DH10B"
/note="Vector: pCMV-SPORT6"
gene <1..2279
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/db_xref="GeneID:23028"
CDS <1..1947
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/codon_start=1
/product="AOF2 protein"
/protein_id="AAH16639.1"
/db_xref="GeneID:23028"
/translation="QTQKVFLFIRNRTLQLWLDNPKIQLTFEATLQQLEAPYNSDTVL
VHRVHSYLERHGLINFGIYKRIKPLPTKKTGKVIIIGSGVSGLAAARQLQSFGMDVTL
LEARDRVGGRVATFRKGNYVADLGAMVVTGLGGNPMAVVSKQVNMELAKIKQKCPLYE
ANGQAVPKEKDEMVEQEFNRLLEATSYLSHQLDFNVLNNKPVSLGQALEVVIQLQEKH
VKDEQIEHWKKIVKTQEELKELLNKMVNLKEKIKELHQQYKEASEVKPPRDITAEFLV
KSKHRDLTALCKEYDELAETQGKLEEKLQELEANPPSDVYLSSRDRQILDWHFANLEF
ANATPLSTLSLKHWDQDDDFEFTGSHLTVRNGYSCVPVALAEGLDIKLNTAVRQVRYT
ASGCEVIAVNTRSTSQTFIYKCDAVLCTLPLGVLKQQPPAVQFVPPLPEWKTSAVQRM
GFGNLNKVVLCFDRVFWDPSVNLFGHVGSTTASRGELFLFWNLYKAPILLALVAGEAA
GIMENISDDVIVGRCLAILKGIFGSSAVPQPKETVVSRWRADPWARGSYSYVAAGSSG
NDYDLMAQPITPGPSIPGAPQPIPRLFFAGEHTIRNYPATVHGVLLSGLREAGRIADQ
FLGAMYTLPRQATPGVPAQQSPSM"
misc_feature 4..180
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/note="SWIRM; Region: SWIRM domain. This SWIRM domain is a
small alpha-helical domain of about 85 amino acid residues
found in chromosomal proteins. This domain is predicted to
be a protein-protein interaction unit"
/db_xref="CDD:pfam04433"
misc_feature 259..666
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/note="Amino_oxidase; Region: Flavin containing amine
oxidoreductase. This family consists of various amine
oxidases, including maze polyamine oxidase (PAO) and
various flavin containing monoamine oxidases (MAO). The
aligned region includes the flavin binding site of these
enzymes. The family also contains phytoene dehydrogenases
and related enzymes. In vertebrates MAO plays an important
role regulating the intracellular levels of amines via
there oxidation"
/db_xref="CDD:pfam01593"
misc_feature 958..1863
/gene="AOF2"
/gene_synonym="BHC110"
/gene_synonym="KIAA0601"
/note="Amino_oxidase; Region: Flavin containing amine
oxidoreductase. This family consists of various amine
oxidases, including maze polyamine oxidase (PAO) and
various flavin containing monoamine oxidases (MAO). The
aligned region includes the flavin binding site of these
enzymes. The family also contains phytoene dehydrogenases
and related enzymes. In vertebrates MAO plays an important
role regulating the intracellular levels of amines via
there oxidation"
/db_xref="CDD:pfam01593"
BASE COUNT 650 a 490 c 552 g 587 t
ORIGIN
1 cagacccaga aggtttttct tttcattaga aaccgcacac tgcagttgtg gttggataat
61 ccaaagattc agctgacatt tgaggctact ctccaacaat tagaagcacc ttataacagt
121 gatactgtgc ttgtccaccg agttcacagt tatttagagc gtcatggtct tatcaacttc
181 ggcatctata agaggataaa acccctacca actaaaaaga caggaaaggt aattattata
241 ggctctgggg tctcaggctt ggcagcagct cgacagttac aaagttttgg aatggatgtc
301 acacttttgg aagccaggga tcgtgtgggt ggacgagttg ccacatttcg caaaggaaac
361 tatgtagctg atcttggagc catggtggta acaggtcttg gagggaatcc tatggctgtg
421 gtcagcaaac aagtaaatat ggaactggcc aagatcaagc aaaaatgccc actttatgaa
481 gccaacggac aagctgttcc taaagagaaa gatgaaatgg tagagcaaga gtttaaccgg
541 ttgctagaag ctacatctta ccttagtcat caactagact tcaatgtcct caataataag
601 cctgtgtccc ttggccaggc attggaagtt gtcattcagt tacaagagaa gcatgtcaaa
661 gatgagcaga ttgaacattg gaagaagata gtgaaaactc aggaagaatt gaaagaactt
721 cttaataaga tggtaaattt gaaagagaaa attaaagaac tccatcagca atacaaagaa
781 gcatctgaag taaagccacc cagagatatt actgccgagt tcttagtgaa aagcaaacac
841 agggatctga ccgccctatg caaggaatat gatgaattag ctgaaacaca aggaaagcta
901 gaagaaaaac ttcaggagtt ggaagcgaat cccccaagtg atgtatatct ctcatcaaga
961 gacagacaaa tacttgattg gcattttgca aatcttgaat ttgctaatgc cacacctctc
1021 tcaactctct cccttaagca ctgggatcag gatgatgact ttgagttcac tggcagccac
1081 ctgacagtaa ggaatggcta ctcgtgtgtg cctgtggctt tagcagaagg cctagacatt
1141 aaactgaata cagcagtgcg acaggttcgc tacacggctt caggatgtga agtgatagct
1201 gtgaataccc gctccacgag tcaaaccttt atttataaat gcgacgcagt tctctgtacc
1261 cttcccctgg gtgtgctgaa gcagcagcca ccagccgttc agtttgtgcc acctctccct
1321 gagtggaaaa catctgcagt ccaaaggatg ggatttggca accttaacaa ggtggtgttg
1381 tgttttgatc gggtgttctg ggatccaagt gtcaatttgt tcgggcatgt tggcagtacg
1441 actgccagca ggggtgagct cttcctcttc tggaacctct ataaagctcc aatactgttg
1501 gcactagtgg caggagaagc tgctggtatc atggaaaaca taagtgacga tgtgattgtt
1561 ggccgatgcc tggccattct caaagggatt tttggtagca gtgcagtacc tcagcccaaa
1621 gaaactgtgg tgtctcgttg gcgtgctgat ccctgggctc ggggctctta ttcctatgtt
1681 gctgcaggat catctggaaa tgactatgat ttaatggctc agccaatcac tcctggcccc
1741 tcgattccag gtgccccaca gccgattcca cgactcttct ttgcgggaga acatacgatc
1801 cgtaactacc cagccacagt gcatggtgtt ctgctgagtg ggctgcgaga agcgggaaga
1861 attgcagacc agtttttggg ggccatgtat acgctgcctc gccaggccac accaggtgtt
1921 cctgcacagc agtccccaag catgtgagac agatgcattc taagggaaga ggcccatgtg
1981 cctgtttctg ccatgtaagg aaggctcttc tagcaatact agatcccact gagaaaatcc
2041 accctggcat ctgggctcct gatcagctga tggagctcct gatttgacaa aggagcttgc
2101 ctcctttgaa tgacctagag cacagggagg aacttgtcca ttagtttgga attgtgttct
2161 tcgtaaagac tgaggcaagc aagtgctgtg aaataacatc atcttagtcc cttggtgtgt
2221 ggggtttgtt ttttttttta tattttgaga ataaaacttc atataaaaaa aaaaaaaaa
//