LOCUS BC016596 1458 bp mRNA linear ROD 18-MAR-2009 DEFINITION Mus musculus family with sequence similarity 53, member A, mRNA (cDNA clone MGC:27806 IMAGE:3257498), complete cds. ACCESSION BC016596 VERSION BC016596.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1458) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1458) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (31-OCT-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lothar Hennighausen Ph.D., Priscilla Furth Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 35 Row: e Column: 20 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31341609. FEATURES Location/Qualifiers source 1..1458 /organism="Mus musculus" /mol_type="mRNA" /strain="NMRI" /db_xref="taxon:10090" /clone="MGC:27806 IMAGE:3257498" /tissue_type="Mammary tumor. WAP-Tag model. 5 months old, gross tissue." /clone_lib="NCI_CGAP_Mam4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1458 /gene="Fam53a" /gene_synonym="Dntnp" /db_xref="GeneID:74504" /db_xref="MGI:MGI:1919225" CDS 4..1212 /gene="Fam53a" /gene_synonym="Dntnp" /codon_start=1 /product="family with sequence similarity 53, member A" /protein_id="AAH16596.1" /db_xref="GeneID:74504" /db_xref="MGI:MGI:1919225" /translation="MVTLITEKLQNQSLDDLTRRACEAGPYSAEKLNKSGHLFPLEIS VDKSPWKALRGGWPTGSQAASGPFSVGPHGVSHTEGLKWQLESPGPMDVGHFLDLHDS TGPPAAPPTKRHCRSLSEPEELARCRSPWRPGSSKVWTPISKRRCNSGGSATLQCCSG VGNPTLQGTLVPGLPRRPVSPAGPTSPLTPRPASASSGFVDGSEGSTSSGPPWLSTGP CPFSSRRRLSLSQEHLVDTGACLPSASSTPTSTPELGRHHGLLRCRSQPCVLDGRRVR RKRRREEDARWTRPSLDFLKMTRTLKNSKSLCSLDYEDDEDDTQEKTLVSSPCNSQGL VGIITPSSSPRIPRPGPDSPSVWASGEPEASPGEGGSSGDPSDWDSAGEEGIFPLDHG DLDLEQIENN" BASE COUNT 336 a 411 c 408 g 303 t ORIGIN 1 gccatggtca ctctcatcac agagaagctg cagaaccaga gtttggatga cctcacccgc 61 agggcctgtg aggctggccc gtattctgct gagaagctga acaaaagtgg ccatttgttc 121 cctttggaga tcagcgtgga taaaagtccc tggaaggcct tacgtggagg atggcccact 181 ggaagccagg cagcctcagg ccccttctca gtgggcccac atggtgtgtc tcacaccgaa 241 ggtctcaagt ggcagctgga atccccaggg cccatggatg tgggccattt cctggacctc 301 catgatagca cagggccacc tgcagcacca ccaaccaagc gacactgccg gtccctgtca 361 gaaccagagg agctagctcg atgccgctcc ccgtggcgcc ctggtagctc caaggtgtgg 421 actcccatct ccaagaggag gtgcaacagt ggtgggagtg ccacacttca gtgctgcagc 481 ggcgtgggca accctactct gcagggcact ctagtccctg gcctacccag gaggcctgtg 541 tcacccgctg gccctacctc acccctgacg ccccggccag cttcagccag cagtggcttt 601 gtggatggca gtgagggcag tacaagctca ggcccaccct ggctttctac aggaccctgc 661 ccattttctt ccaggcgccg actgtccctc tcacaagagc accttgtaga tacaggcgct 721 tgcctgcctt cagccagcag cacccccact tccacacctg agctaggccg gcaccatggc 781 ctgctccggt gccgctcaca gccttgtgta ttggatggga ggagggtccg gcgcaagcga 841 agacgggagg aggatgccag gtggacacgc ccgtccttgg actttctgaa aatgacacgg 901 actttaaaaa actccaagag cctttgctcc ctggactatg aagacgatga ggatgacacc 961 caggagaaga ctcttgtgtc ctccccgtgt aactcacagg gcctcgtggg catcatcaca 1021 ccgagctcta gcccaaggat tcccaggcct ggccctgaca gccccagtgt ctgggcgtca 1081 ggggagccag aggccagccc aggcgagggt gggagcagtg gggaccccag tgactgggac 1141 agtgcaggag aggagggcat cttcccactg gaccacggcg acctggactt ggagcagatt 1201 gagaacaact gactttggct gagcaggatg actgtggttg ctgtctgtca ccttggtgcc 1261 tgaccagtgg aaataacttg tgtgttattt tgaaaattga ggcgtaattt tgattcagtt 1321 tttcctaaag aagtattttg catttttatg gcttctacag tttgagagag cttctctatt 1381 ttgaaatggg tttcagaggg cattctatta aacatgattc tgcctagaaa aaaaaaaaaa 1441 aaaaaaaaaa aaaaaaaa //