LOCUS BC014945 3054 bp mRNA linear HUM 06-JUL-2004
DEFINITION Homo sapiens armadillo repeat containing 5, mRNA (cDNA clone
MGC:22948 IMAGE:4860377), complete cds.
ACCESSION BC014945
VERSION BC014945.1
KEYWORDS MGC.
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 3054)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 3054)
AUTHORS Strausberg,R.
TITLE Direct Submission
JOURNAL Submitted (01-OCT-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Cancer Genomics Office, National Cancer
Institute, 31 Center Drive, Room 11A03, Bethesda, MD 20892-2590,
USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: ATCC/DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Genome Sequence Centre,
BC Cancer Agency, Vancouver, BC, Canada
info@bcgsc.bc.ca
Steve Jones, Sarah Barber, Mabel Brown-John, Yaron Butterfield,
Andy Chan, Steve S. Chand, William Chow, Alison Cloutier, Ruth
Featherstone, Malachi Griffith, Obi Griffith, Ran Guin, Nancy Liao,
Kim MacDonald, Amara Masson, Mike R. Mayo, Josh Moran, Ryan Morin,
Teika Olson, Diana Palmquist, Anca Petrescu, Anna Liisa Prahbu,
Parvaneh Saeedi, JR Santos, Angelique Schnerch, Ursula Skalska,
Duane Smailus, Jeff Stott, Miranda Tsai, George Yang, Jacquie
Schein, Asim Siddiqui, Rob Holt, Marco Marra.
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 34 Row: g Column: 1.
FEATURES Location/Qualifiers
source 1..3054
/db_xref="H-InvDB:HIT000036910"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="MGC:22948 IMAGE:4860377"
/tissue_type="Skin, melanotic melanoma, high MDR."
/clone_lib="NIH_MGC_49"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene 1..3054
/gene="ARMC5"
/gene_synonym="FLJ00019"
/gene_synonym="FLJ13063"
/db_xref="GeneID:79798"
CDS 427..2742
/gene="ARMC5"
/gene_synonym="FLJ00019"
/gene_synonym="FLJ13063"
/codon_start=1
/product="ARMC5 protein"
/protein_id="AAH14945.1"
/db_xref="GeneID:79798"
/translation="MKTDSIQNRTARALGNLAMEPESCGDIHCAGAVPLLVESLTACQ
DSQCLQSVVRALRNLADSPQHRLALAQQGAVRPLAELLATAPDAALTLALVRALLELS
RGCSRACAEQLSLGGGLGPLVSLASHPKRAVREGTILILANLCAQGLIRPALGNAGGV
EVLVDELRQRRDPNGASPTSQQPLVRAVCLLCREAINRARLRDAGGLDLLMGLLRDPR
ASAWHPRIVAALVGFLYDTGALGRLQALGLVPLLAGQLCGEAGEEEEEGREAASWDFP
EERTPERAQGGSFRSLRSWLISEGYATGPDDISPDWSPEQCPPEPMEPASPAPTPTSL
RAPRTQRTPGRSPAAAIEEPWGREGPALLLLSRFSQAPDPSGALVTGPALYGLLTYVT
GAPGPPSPRALRILSRLTCNPACLEAFVRSYGAALLRAWLVLGVAPDDWPAPRARPTL
HSRHRELGERLLQNLTVQAESPFGVGALTHLLLSGSPEDRVACALTLPFICRKPSLWR
RLLLEQGGLRLLLAALTRPAPHPLFLFFAADSLSCLQDLVSPTVSPAVPQAVPMDLDS
PSPCLYEPLLGPAPVPAPDLHFLLDSGLQLPAQRAASATASPFFRALLSGSFAEAQMD
LVPLRGLSPGAAWPVLHHLHGCRGCGAALGPVPPPGQPLLGSEAEEALEAAGRFLLPG
LEEELEEAVGRIHLGPQGGPESVGEVFRLGRPRLAAHCARWTLGSEQCPRKRGLALVG
LVEAAGEEAGPLTEALLAVVMGIELGARVPA"
BASE COUNT 492 a 1000 c 1016 g 546 t
ORIGIN
1 ccgggccgca ccaccgctgg ggggcagcga agcgagccta gaggagaaaa ggcggtcccc
61 gccgagtgca cgccgggggc ggggcacggc acgaaggctc cgtggtcgga cttctgggct
121 gttcggaggc cccggcccac ctggagggcc ctggaagagt ttccagcgct tcccgaggta
181 ggcgtgagaa gctcgacgcg gaccacatct ccctcgtcgg ccgcgtcggg agcttctagc
241 cccgcccccg cgtcgggccc cgccccctcc gctgtgtcgt cgtctagtcc tacgccgcca
301 gtgcgcctgc gcaagacgct ggacttggcg ctcagcatcc tagccgattg ctgtacggaa
361 ggggcgtgcc ggaccgaagt gcgcagactc ggaggcatac tccctttggt gaccattctt
421 cagtgcatga agacagacag catccagaac cgaacggccc gtgccctggg gaacttagcc
481 atggaacctg agagctgtgg ggacatccac tgtgctggtg ctgttcccct gcttgtggag
541 agcctgacag cctgccagga ctcgcagtgc ctacagagcg tggtgcgtgc cctccgtaac
601 ctggcagact caccccagca ccgcctggcc ttggcacagc agggagcagt gcgtccgctg
661 gccgagctcc tggccactgc cccagatgct gcactgacct tagccctcgt ccgtgccctc
721 ctggaactca gccgaggctg ctcccgggcc tgtgctgagc agctaagtct gggtggggga
781 ttgggcccac tcgtcagcct ggcttcccac cccaagcggg cagtacgcga gggaaccatt
841 ctgatcctcg ccaacctgtg tgcccagggc ctgattcggc ctgcactggg caatgctggt
901 ggcgtggagg tgctggtaga tgagctccgg cagcgccggg atcctaatgg agctagccca
961 acctcccagc agcccctggt gcgggctgtg tgcctcctat gtcgtgaggc catcaaccgg
1021 gcccgactgc gggatgctgg tggcttggat ctactgatgg gcctgctgcg ggaccctcgt
1081 gcaagcgcat ggcaccctcg tattgtggct gcccttgtgg ggtttctgta tgacactggg
1141 gccctgggcc ggctgcaggc tctgggactt gtgcctctcc tggctgggca gctgtgtggt
1201 gaggctggtg aggaggaaga agagggaaga gaagctgctt cctgggactt tcctgaggag
1261 aggacccctg agcgggcaca gggtggaagc ttccggagcc tcaggtcgtg gctgatctcc
1321 gagggctatg ccacaggccc tgatgacatc tcccccgact ggtctcctga gcagtgtccg
1381 ccggagccca tggagccggc cagccccgcc ccgaccccga cctcgctgcg ggcaccacgc
1441 acccaacgca ctccgggccg cagccccgcc gccgccatcg aggagccttg gggacgcgaa
1501 gggccagccc tgctgctgct gtcgcgcttt tcccaggccc ctgacccaag tggggcactt
1561 gtgaccggcc cggcgctgta cggcctgctg acctatgtga ccggcgcacc gggcccgccc
1621 agcccacgtg cactgcgcat tctgtcacgc ctcacctgca accctgcctg cctcgaggcc
1681 ttcgtgcgca gctatggcgc ggcgctgctg cgggcctggc tggtgctggg ggtggcgcct
1741 gacgattggc cggcaccacg tgcccggccc actctccaca gccggcaccg agagctgggg
1801 gagaggctac tgcagaacct gacggttcag gctgagtcgc cctttggggt tggggccctg
1861 acgcacctgc tgctctctgg gagccctgag gaccgagtgg cctgcgcgct gaccctgccc
1921 ttcatctgcc ggaagccctc tctgtggcgc cggctgcttc tggagcaggg tggtctccgg
1981 ctcctccttg cggcgctgac ccggccggcc ccacacccgc tcttcctctt ctttgccgcg
2041 gactcccttt cctgcctcca agacctggtg tctcccactg tgagcccagc tgtcccacag
2101 gcagtcccca tggacctaga ctcaccttcc ccttgcctct atgaacctct gctgggccca
2161 gcccctgtcc cagctcccga cctgcacttc ctgctggact caggcctcca gctccctgcc
2221 cagcgagcgg cctcagccac cgcctcccct ttcttccggg ccctgctgtc aggcagcttt
2281 gcagaagccc agatggacct ggtgcccctg cgaggtctgt cgcctggtgc agcctggcct
2341 gtcctgcatc atttgcatgg ttgtcggggg tgtggggctg ccctggggcc cgtgccccca
2401 ccaggccagc ccctgctggg ttcagaggcc gaggaggcac tggaggctgc tggccgtttc
2461 ctactgcctg ggctggagga ggagctggaa gaggccgtgg gccgcatcca cctgggaccc
2521 cagggtggcc cggagtcagt gggtgaggtg ttccgcctgg gccggccccg gctggctgcc
2581 cactgtgccc gctggacact ggggtcagag cagtgcccga ggaagcgggg tctggccctg
2641 gtggggcttg tggaggcagc aggtgaagag gcagggcccc tgacggaggc tttgctggct
2701 gtggtgatgg ggattgagtt gggggcaagg gtccctgcct agactgttga cgtcccctgg
2761 gaaggggacc caaggatgaa ttggctgtga aggatcctcc ctgagactgg caagggagga
2821 ggctgagcag aaggagtcat catggaggag cggtgagaac atggaaccgg actccaagat
2881 gacgatctaa agacccggga gcgagaagcc aaggccaggt tctgggtgta gggcccagag
2941 aagcagaaca gcccagagcc ccaggtgcct ggcctggcct agacctctgg aattgagatt
3001 aaacaatttg gagttggata aaaaaaaaaa aaaaaaaaaa aaaaaaaaaa aaaa
//