LOCUS BC009860 1400 bp mRNA linear HUM 02-JUL-2005
DEFINITION Homo sapiens toll-like receptor adaptor molecule 1, mRNA (cDNA
clone IMAGE:3929560), partial cds.
ACCESSION BC009860
VERSION BC009860.2
KEYWORDS .
SOURCE Homo sapiens (human)
ORGANISM Homo sapiens
Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi;
Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini;
Catarrhini; Hominidae; Homo.
REFERENCE 1 (bases 1 to 1400)
AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G.,
Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D.,
Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K.,
Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F.,
Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L.,
Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L.,
Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S.,
Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J.,
Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J.,
McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S.,
Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W.,
Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A.,
Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S.,
Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y.,
Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D.,
Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M.,
Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E.,
Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A.
CONSRTM Mammalian Gene Collection Program Team
TITLE Generation and initial analysis of more than 15,000 full-length
human and mouse cDNA sequences
JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002)
PUBMED 12477932
REFERENCE 2 (bases 1 to 1400)
CONSRTM NIH MGC Project
TITLE Direct Submission
JOURNAL Submitted (02-JUL-2001) National Institutes of Health, Mammalian
Gene Collection (MGC), Bethesda, MD 20892-2590, USA
REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov
COMMENT On Aug 19, 2003 this sequence version replaced BC009860.1.
Contact: MGC help desk
Email: cgapbs-r@mail.nih.gov
Tissue Procurement: DCTD/DTP
cDNA Library Preparation: Rubin Laboratory
cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL)
DNA Sequencing by: Institute for Systems Biology
http://www.systemsbiology.org
contact: amadan@systemsbiology.org
Anup Madan, Jessica Fahey, Erin Helton, Mark Ketteman, Anuradha
Madan, Stephanie Rodrigues, Amy Sanchez and Michelle Whiting
Clone distribution: MGC clone distribution information can be found
through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov
Series: IRAL Plate: 25 Row: c Column: 18.
FEATURES Location/Qualifiers
source 1..1400
/db_xref="H-InvDB:HIT000087396"
/organism="Homo sapiens"
/mol_type="mRNA"
/db_xref="taxon:9606"
/clone="IMAGE:3929560"
/tissue_type="Ovary, adenocarcinoma"
/clone_lib="NIH_MGC_9"
/lab_host="DH10B-R"
/note="Vector: pOTB7"
gene <1..1400
/gene="TICAM1"
/gene_synonym="MGC35334"
/gene_synonym="PRVTIRB"
/gene_synonym="TICAM-1"
/gene_synonym="TRIF"
/db_xref="GeneID:148022"
/db_xref="MIM:607601"
CDS <1..1073
/gene="TICAM1"
/gene_synonym="MGC35334"
/gene_synonym="PRVTIRB"
/gene_synonym="TICAM-1"
/gene_synonym="TRIF"
/codon_start=3
/product="TICAM1 protein"
/protein_id="AAH09860.2"
/db_xref="GeneID:148022"
/db_xref="MIM:607601"
/translation="ETSPPPPPPPPSSTPCSAHLTPSSLFPSSLESSSEQKFYNFVIL
HARADEHIALRVREKLEALGVPDGATFCEDFQVPGRGELSCLQDAIDHSAFIILLLTS
NFDCRLSLHQVNQAMMSNLTRQGSPDCVIPFLPLESSPAQLSSDTASLLSGLVRLDEH
SQIFARKVANTFKPHRLQARKAMWRKEQDTRALREQSQHLDGERMQAAALNAAYSAYL
QSYLSYQAQMEQLQVAFGSHMSFGTGAPYGARMPFGGQVPLGAPPPFPTWPGCPQPPP
LHAWQAGTPPPPSPQPAAFPQSLPFPQSPAFPTASPAPPQSPGLQPLIIHHAQMVQLG
LNNHMWNQRGSQAPEDKTQEAE"
BASE COUNT 290 a 478 c 367 g 265 t
ORIGIN
1 cagaaacatc ccctcctcct cctcctcctc ctccttcatc tactccttgt tcagctcacc
61 tgaccccctc ctccctgttc ccttcctccc tggaatcatc atcggaacag aaattctata
121 actttgtgat cctccacgcc agggcagacg aacacatcgc cctgcgggtt cgggagaagc
181 tggaggccct tggcgtgccc gacggggcca ccttctgcga ggatttccag gtgccggggc
241 gcggggagct gagctgcctg caggacgcca tagaccactc agctttcatc atcctacttc
301 tcacctccaa cttcgactgt cgcctgagcc tgcaccaggt gaaccaagcc atgatgagca
361 acctcacgcg acaggggtcg ccagactgtg tcatcccctt cctgcccctg gagagctccc
421 cggcccagct cagctccgac acggccagcc tgctctccgg gctggtgcgg ctggacgaac
481 actcccagat cttcgccagg aaggtggcca acaccttcaa gccccacagg cttcaggccc
541 gaaaggccat gtggaggaag gaacaggaca cccgagccct gcgggaacag agccaacacc
601 tggatggtga gcggatgcag gcggcggcac tgaacgcagc ctactcagcc tacctccaga
661 gctacttgtc ctaccaggca cagatggagc agctccaggt ggcttttggg agccacatgt
721 catttgggac tggggcgccc tatggggctc gaatgccctt tgggggccag gtgcccctgg
781 gagccccgcc accctttccc acttggccgg ggtgcccgca gccgccaccc ctgcacgcat
841 ggcaggctgg caccccccca ccgccctccc cacagccagc agcctttcca cagtcactgc
901 ccttcccgca gtccccagcc ttccctacgg cctcacccgc accccctcag agcccagggc
961 tgcaacccct cattatccac cacgcacaga tggtacagct ggggctgaac aaccacatgt
1021 ggaaccagag agggtcccag gcgcccgagg acaagacgca ggaggcagaa tgaccgcgtg
1081 tccttgcctg accacctggg gaacacccct ggacccaggc atcggccagg accccataga
1141 gcaccccggt ctgccctgtg cccggtggac agtggaagat gaggtcatct gccactttca
1201 ggacattgtc cgggagccct tcatttagga caaaacgggc gcgatgatgc cctggctttc
1261 agggtggtca gaactggata cggtgtttac aattccaatc tctctatttc tgggtgaagg
1321 gtcttggtgg tgggggtatt gctacggtct tttaattata ataaatattt attgaatgct
1381 tcaaaaaaaa aaaaaaaaaa
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