LOCUS BC008158 1038 bp mRNA linear ROD 04-AUG-2006 DEFINITION Mus musculus interferon-induced protein 35, mRNA (cDNA clone MGC:7005 IMAGE:3155505), complete cds. ACCESSION BC008158 VERSION BC008158.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1038) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1038) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (22-MAY-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lothar Hennighausen Ph.D., Chu-Xia Deng Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 6 Row: e Column: 11 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21312543. FEATURES Location/Qualifiers source 1..1038 /organism="Mus musculus" /mol_type="mRNA" /strain="129,C57BL/6J,FVB/N" /db_xref="taxon:10090" /clone="MGC:7005 IMAGE:3155505" /tissue_type="Mammary tumor. Brca1-/fl; MMTV-Cre model. 10 months old, gross tissue." /clone_lib="NCI_CGAP_Mam3" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1038 /gene="Ifi35" /gene_synonym="IFP35" /db_xref="GeneID:70110" /db_xref="MGI:MGI:1917360" CDS 95..955 /gene="Ifi35" /gene_synonym="IFP35" /codon_start=1 /product="interferon-induced protein 35" /protein_id="AAH08158.1" /db_xref="GeneID:70110" /db_xref="MGI:MGI:1917360" /translation="MSVTLQTVLYSLQEEQARLKMRLQELQQLKRERTGSPGAKIPFS VPEVPLVFQGQTKQGRQVPKFVVSNLKVCCPLPEGSALVTFEDPKVVDRLLQQKEHRV NLEDCWLRVQVQPLELPVVTNIQVSSQPDNHRVLVSGFPAGLRLSEEELLDKLEIFFG KAKNGGGDVETREMLQGTVMLGFADEEVAQHLCQIGQFRVPLDRQQVLLRVSPYVSGE IQKAEIKFQQAPHSVLVTNIPDVMDAQELHDILEIHFQKPTRGGGEVEALTVVPSGQQ GLAIFTSESS" BASE COUNT 251 a 269 c 293 g 225 t ORIGIN 1 gagccacctc tgaggggtca aagagtttag tccttcagaa ctcttcactg ccaaccctgc 61 tctgaagccc cagcttctgc cagacgtgag agccatgtct gtgaccctgc aaactgtcct 121 ctacagtctt caggaggagc aagccaggct caagatgagg ctgcaggagc tgcagcagct 181 caaaagggag cgcacaggct ctcccggagc caagatccca ttctcagtac ctgaagttcc 241 tctggtattc caaggccaaa ctaagcaggg caggcaagtg cccaagtttg tagtttctaa 301 cttgaaggtc tgctgccctc tgcctgaagg ttctgctctg gtcacctttg aggaccccaa 361 agtggttgat cggttgctac aacaaaagga acacagagtt aacttagagg actgctggct 421 gcgggtgcag gtccagccct tggagctgcc tgtggtgacc aacattcagg tgtccagcca 481 gccagataac cacagggtgc tcgttagtgg ttttcctgct ggacttaggc tgagtgaaga 541 ggaactgttg gacaagctgg agatcttctt tggcaaggcc aagaatggag gtggggatgt 601 agagacccgg gagatgctgc aagggaccgt catgctaggg tttgctgatg aagaagtggc 661 ccagcactta tgccagattg gccagttcag agtcccactg gaccggcagc aggtcctcct 721 gagggtctct ccctatgtga gtggtgagat ccagaaagcc gagatcaaat tccagcaagc 781 ccctcattca gtgctggtga caaatattcc tgatgtcatg gatgcccagg aactgcatga 841 catccttgag atccacttcc agaagcccac tcgtgggggc ggggaggtgg aggccctgac 901 agttgtgcct tcagggcagc agggcctggc tatcttcact tccgagtcaa gctaggcctg 961 catgtccacc tgctggggac taggatcact tactgcctaa tgctaccaag aacggtcaaa 1021 gtgccaaaaa aaaaaaaa //