LOCUS BC006046 1443 bp mRNA linear ROD 21-SEP-2006 DEFINITION Mus musculus sperm flagellar 1, mRNA (cDNA clone MGC:8192 IMAGE:3590641), complete cds. ACCESSION BC006046 VERSION BC006046.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1443) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1443) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Gilbert Smith, Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 11 Row: c Column: 13. FEATURES Location/Qualifiers source 1..1443 /organism="Mus musculus" /mol_type="mRNA" /strain="Czech II" /db_xref="taxon:10090" /clone="MGC:8192 IMAGE:3590641" /tissue_type="Mammary tumor metastatized to lung. Tumor arose spontaneously from a senescent normal mammary (clonal) outgrowth infected with the virus MMTV." /clone_lib="NCI_CGAP_Lu29" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1443 /gene="Spef1" /gene_synonym="Clamp" /db_xref="GeneID:70997" /db_xref="MGI:MGI:3513546" CDS 78..782 /gene="Spef1" /gene_synonym="Clamp" /codon_start=1 /product="sperm flagellar 1" /protein_id="AAH06046.1" /db_xref="GeneID:70997" /db_xref="MGI:MGI:3513546" /translation="MESSVDEEALHQLYLWVDNIPLSRPKRNLSRDFSDGVLVAELIK FYFPKMVEMHNYVPANSLQQKLSNWGHLNRKVLNKLNFSVPDDVMRKIAQCSPGVVEL VLIPLRQRLEERQRRQKLGVGSLQELAPQDSSGYMDMGLPQKVRGEGAPALGEQLREG RPLASRPPGYNQALQGDPSFVLQIAEKEQELLASQETVQVLQMKVKRLEHLLQLKNVR IDDLSRRLQQAERKQR" BASE COUNT 320 a 393 c 439 g 291 t ORIGIN 1 gcgagaggag gcatttgaaa ggtcctgggg ctggcgctgg gctctgtcgg gaacgttgag 61 gccttgctct ggatccaatg gaaagcagcg tggatgagga ggctctgcac cagctgtacc 121 tctgggtaga caatatccct ctgtccagac ccaagagaaa cctctcccgg gacttcagtg 181 acggagtcct ggttgcagag cttatcaagt tttacttccc caagatggtg gagatgcaca 241 attatgtccc tgccaactct ctccagcaga agctcagcaa ctggggtcac ctgaacagaa 301 aggtgctgaa caagctgaac ttctcggtcc ctgacgatgt gatgcggaag attgcgcagt 361 gttctccggg agtagtggag ctagtgctca ttccactgag gcagcgcctg gaggagcggc 421 agaggcgcca gaagctgggt gttggctcct tacaggagct ggctcctcag gatagcagtg 481 gctacatgga tatgggtttg ccccagaagg ttcgaggaga gggtgcccca gccttgggag 541 agcagctcag agagggccgt ccgttggctt cccgaccccc tgggtataac caggcgctgc 601 agggtgatcc gagcttcgtc ctccagatcg ctgaaaagga gcaggagctg ttggcctctc 661 aagagacagt acaggtcctt cagatgaagg tgaagcgtct ggaacatctg ctccaactta 721 agaacgtgcg catcgatgat ctctcccggc ggctccagca ggccgagcgc aagcagcggt 781 gagcggtgcc agggctgcgc cgggcttccc agtacccgcc cgagcccaga cgccgcgacc 841 cacccactca cctgccgacg cagggttggg agggcggagc gagctgctca ctagtgcctc 901 ctgcagctac ggcgctcggc tgcggagggt tcgagcgaac gtggggttgc tcaacgccga 961 ggccggggac tgatcctcct ccttacactc catctgggcc aggaaaaagg atcactttcc 1021 acagcccaga aagcctgtac atcgcatgat ctcccaaacc actttgaagc tcccggcgct 1081 gggcctggag aggcggtcct ctgtctcgtt ccactcctct agaaccggtt cctttctcag 1141 catagaagat agcttcatct ctatccttgc taaatctcca aggcctccga cactcgagaa 1201 attatcccgg gaagctgagg aattctcttg cccatcctga gtgctgaccg gggaccagtt 1261 ttagggctgg aaatcacagc agctggagag gaagggataa ggtgttgaag taggcgggag 1321 taagggaggc acccagctgt gcagtcgctc tcctctcacg gagcattcta aggagtgcct 1381 gggaagatag ggcagagttg tctccattaa aggtgctgtt gtgcgttaaa aaaaaaaaaa 1441 aaa //