LOCUS BC005711 1346 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus alanyl-tRNA synthetase domain containing 1, mRNA (cDNA clone MGC:11770 IMAGE:3497962), complete cds. ACCESSION BC005711 VERSION BC005711.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 1346) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 1346) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Jeffrey Green M.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 16 Row: n Column: 3 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 21450212. FEATURES Location/Qualifiers source 1..1346 /organism="Mus musculus" /mol_type="mRNA" /strain="FVB/N" /db_xref="taxon:10090" /clone="MGC:11770 IMAGE:3497962" /tissue_type="Mammary tumor. C3(1)-Tag model. Infiltrating ductal carcinoma. 5 month old virgin mouse." /clone_lib="NCI_CGAP_Mam6" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..1346 /gene="Aarsd1" /db_xref="GeneID:69684" /db_xref="MGI:MGI:1916934" CDS 46..1284 /gene="Aarsd1" /codon_start=1 /product="alanyl-tRNA synthetase domain containing 1" /protein_id="AAH05711.1" /db_xref="GeneID:69684" /db_xref="MGI:MGI:1916934" /translation="MAFLCQRDSYAREFTTTVVSCSPAELQTDASGGKKEVLSGFHVV LEDTLLFPEGGGQPDDRGTINDISVLRVTRRGAQADHFTESPLSPGSQVQVRVDWERR FDHMQQHSGQHLITAVADLLFGLKTTSWELGRLRSVIELDSPSVTAEQVAAIEQSVNQ KIRDRLPVSVRELSLDDPEVEQVRGRGLPDDHAGPIRVVTIEGVDSNMCCGTHVSNLS DLQVIKILGTEKGKKNKSNLIFLAGNRVLKWMERSHGSEKALTSLLKCGVEDHVEAVK KLQNATKLLQKNNLNLLRDLAVHTAHSLRSSPAWGGVVTLHRKEGDSEFMNIIANEIG SEETLLFLTVGDEKGAGLFLLAGPAEAVETLGPRVAEVLEGKGAGKKGRFQGKATKMS RRAEAQALLQDYVSTQSAEE" BASE COUNT 321 a 324 c 433 g 268 t ORIGIN 1 ccggcttttc tgcgcgcgcg ggtctctccg gcctaggaga ccgcgatggc gttcctgtgt 61 cagcgcgaca gctacgcacg ggagttcacc accaccgtgg tctcctgtag tcccgccgag 121 ctgcagacgg acgcgagcgg cggcaagaaa gaagtgttga gcggattcca tgtggttctg 181 gaagacacgc tgcttttccc cgagggcggg ggacagcctg atgaccgtgg taccatcaat 241 gacatctctg tgctgagggt gacccgtcgt ggggcccagg ccgatcactt cacggagtca 301 cctctgtccc ctgggagtca agtccaggtc cgggtggact gggagcggag gtttgaccac 361 atgcagcagc attcagggca acatctcatc accgcggttg ctgaccttct cttcgggctg 421 aagacaacgt catgggagtt agggagactc cggagtgtga ttgagttgga cagcccttct 481 gtgactgctg agcaggtggc tgctatcgag cagagtgtca atcagaaaat cagagaccgg 541 ctgcctgtga gtgttcgaga gctgagcctg gatgaccctg aggtggagca ggtgaggggt 601 cggggtttgc ccgatgatca tgctgggccc attcgagttg ttaccatcga aggtgtagac 661 tccaacatgt gctgtgggac gcacgtgagc aatctcagtg accttcaggt cattaagatt 721 ctggggactg agaaagggaa aaagaacaaa agcaacctga tatttctggc tgggaatcgg 781 gtactgaagt ggatggagcg aagtcatgga agtgaaaagg ccttgacctc actacttaag 841 tgtggcgttg aggatcatgt ggaagcagta aaaaagctcc agaatgccac caagctcctg 901 cagaagaaca acctgaacct ccttagagac ctggctgtgc acactgccca cagcctcagg 961 agcagcccag cctggggtgg tgtggtcaca ctacacagga aagagggtga ttctgaattc 1021 atgaatatca ttgctaatga gattggatcg gaggagaccc tcctgttctt aactgtgggg 1081 gatgagaagg gtgctgggct cttcttactg gcaggcccgg cagaggctgt ggaaaccctg 1141 gggcccaggg tggctgaagt cttggaaggc aaaggagcag ggaagaaggg ccgcttccag 1201 ggcaaagcca ccaagatgag ccgccgggca gaggcgcagg cgcttctgca ggactatgtc 1261 agcacacaga gtgctgagga gtgaggggcc aggacgtcgt ccctgtgacc aacagtaaaa 1321 tattgtgact caaaaaaaaa aaaaaa //