LOCUS BC005650 2620 bp mRNA linear ROD 21-JUL-2006 DEFINITION Mus musculus phosphatidylinositol glycan anchor biosynthesis, class M, mRNA (cDNA clone MGC:7173 IMAGE:3257474), complete cds. ACCESSION BC005650 VERSION BC005650.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 2620) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 2620) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (02-APR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Lothar Hennighausen Ph.D., Priscilla Furth Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Baylor College of Medicine Human Genome Sequencing Center Center code: BCM-HGSC Web site: http://www.hgsc.bcm.tmc.edu/cdna/ Contact: amg@bcm.tmc.edu Gunaratne, P.H., Garcia, A.M., Lu, X., Hulyk, S.W., Loulseged, H., Kowis, C.R., Sneed, A.J., Martin, R.G., Muzny, D.M., Nanavati, A.N., Gibbs, R.A. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 6 Row: g Column: 14 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543479. FEATURES Location/Qualifiers source 1..2620 /organism="Mus musculus" /mol_type="mRNA" /strain="NMRI" /db_xref="taxon:10090" /clone="MGC:7173 IMAGE:3257474" /tissue_type="Mammary tumor. WAP-Tag model. 5 months old, gross tissue." /clone_lib="NCI_CGAP_Mam4" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..2620 /gene="Pigm" /db_xref="GeneID:67556" /db_xref="MGI:MGI:1914806" CDS 154..1425 /gene="Pigm" /codon_start=1 /product="phosphatidylinositol glycan anchor biosynthesis, class M" /protein_id="AAH05650.1" /db_xref="GeneID:67556" /db_xref="MGI:MGI:1914806" /translation="MSYPMHWGEWILNFRVPPAGVFGVAFLARVALVFYGVFQDRTLL VRYTDIDYHVFTDAARFVTEGRSPYLRATYRYTPLLSWLLTPNVYLSELFGKFLFISC DLLTAFLLYRLLLLKGLGRRQACGYCVFWLLNPLPMAVSSRGNADSIVASLVLSTLYF IEKRLIACAAVFYGFAVHMKMYPVTYILPIALHLRPERDDDERLRHARFSFQARLYDF LRRLCSWAVLLFVAVAGLTFVALSFGFYYKYGWEFLEHTYFYHLTRRDIRHNFSPYFY MLYLTAESKWSFTLGIAAFLPQFILLSAASFAYYRDLVFCCFLHTSIFVTFNKVCTSQ YFLWYLCLLPLVMPLVRMPWKRAVVLLLFWFIGQALWLAPAYVLEFQGKNTFLFIWLA GLFFLLINCSILIQIISHYKEDRLTERIKYD" BASE COUNT 606 a 609 c 630 g 775 t ORIGIN 1 ggaagtgatc attcctcggt tcttcctgtc ggtgctgtag cggaggagat gctcccggcg 61 gctgagaggc gtcagcccga ggacggttag cgagaggggc gcagtgtgga cccggggccc 121 ggccgggccg ggcgggtggc ccgcacttgg accatgagct accccatgca ctggggggaa 181 tggatcctga actttcgggt gccgcccgcc ggggtgttcg gcgtggcctt cctggcccgg 241 gtcgccctgg ttttctacgg tgtcttccag gaccggactc tgctggtgag gtacaccgac 301 atagactacc acgtgttcac ggacgccgcg cgcttcgtca cggaagggcg ctccccgtac 361 ctgcgggcga cctaccgcta caccccgctc ctgagctggc tcctcacccc caacgtctac 421 ctcagcgaac tcttcggcaa gtttctcttc atcagctgcg atctcctcac cgccttcctc 481 ctgtaccgcc tgctgctgct caaggggctg gggcgccgcc aagcctgtgg ctactgcgtc 541 ttctggctgc tcaacccttt gcccatggcg gtgtccagcc ggggcaacgc ggactccatc 601 gtcgcctccc tggttctctc gaccctgtac ttcatagaga aacggctcat cgcgtgcgcc 661 gcggtgttct atggcttcgc ggtgcacatg aagatgtacc cggtgaccta catcctcccc 721 atagcgctcc atctgcggcc cgagcgcgac gatgacgagc gtctccggca tgcccggttc 781 tctttccagg ctcgtttgta cgacttcctg aggaggctgt gtagctgggc agtgctgctt 841 ttcgtagcgg ttgcagggct cacgtttgtt gccctgagct tcggttttta ctataagtac 901 ggttgggagt ttttggagca cacctacttt tatcacctaa ctaggaggga tatccgccat 961 aatttctctc cgtacttcta tatgctgtat ttgactgccg agagcaagtg gagttttact 1021 ctggggattg cggcgttcct gccacagttc atcttgctgt cagccgcatc tttcgcctat 1081 tacagagacc ttgtcttctg ctgtttcctt catacgtcca tttttgtgac ttttaacaaa 1141 gtctgcacct ctcagtactt tctttggtac ctctgccttc tgcctctggt gatgccactg 1201 gtgaggatgc cttggaaaag agccgtagtc ctcttactgt tctggttcat aggacaggcc 1261 ttatggctgg ctcctgcata tgttctagag tttcaaggaa agaacacctt cctgtttatt 1321 tggttagccg gtttgttctt ccttctgatc aactgttcca tactgattca gattatttcc 1381 cattacaagg aggaccgcct aacggagaga atcaaatacg actaatgtgt tctggatctt 1441 ctgcaacatt ctgattttgc cgtatggact aggaggcttt ggaatttttc tcctccctga 1501 acattctaag cactctagtg aaagttcctt tgttccaata gaaattaaaa ccagtgttgg 1561 ccttatatat aaagggggcc caagaactga ggtccatggt ccatccttta gaagtcttag 1621 ggctcatttg cttgatgaga agaaaaccat tcctgtttca cagttgagaa gccggtgaag 1681 ctagaagatg ctgaaatatt tttgaacagt agaggaataa ggtctctagc agcgtttgtt 1741 cctgtcacat ggtgctactg ttgtaccttc agcccctgcc ttttttgttt ttcctgcagt 1801 tctgacagcg gtggaagttg acaaaattcc taaagtacaa catttttacg tattaagtat 1861 taacagttcc atgctcggtt ggggaagtct gaaatttttg tagtaagtgt gggggcttag 1921 aagagaacta atccaaagaa tctaaattgt gatcatgtat ttgttttgta actgagtttt 1981 tcagtattag taccagtggt attcatttta tataaaaaga ttaaatttaa actcatccac 2041 tgtagacctg agtttaagaa aacgaaatgg agcattatta acatgtatat gcttatcctt 2101 tttctaactg ctaggaagac ttttcctcta gagtttaagc tgagagcggt ctgttgtaaa 2161 agtggtaaaa tttagatgct aaagcctaag ttttgagtat aacttcactt gctctcttct 2221 ggttttatca tctaaattgt tacaaaggag aacattgttt ataaggcata aatcctacac 2281 tctgaaaatt ccaggataga aaggaagact gcttgctgta aagcatgagt gctgcgtgct 2341 gtcattggac aatcaagagg tggtaaggga tttgaggaat tacagaaatg aggctgtgag 2401 gagcaggtct ttctacttat cacttgaagt aaacacagtg aaactgtatg aataaacttt 2461 ctcaactgta tgaataaaca ttctaaaata tttttagaaa acatagagcc tgtctgtgtt 2521 gagggttttc taacattcaa agatgcagta gcaatagatg agtataattt tttttttaaa 2581 gaataaaatt atcatcttta aatgcaaaaa aaaaaaaaaa //