LOCUS BC005460 3005 bp mRNA linear ROD 15-JUL-2006 DEFINITION Mus musculus nucleolin, mRNA (cDNA clone MGC:6363 IMAGE:3495665), complete cds. ACCESSION BC005460 VERSION BC005460.1 KEYWORDS MGC. SOURCE Mus musculus (house mouse) ORGANISM Mus musculus Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Glires; Rodentia; Myomorpha; Muroidea; Muridae; Murinae; Mus; Mus. REFERENCE 1 (bases 1 to 3005) AUTHORS Strausberg,R.L., Feingold,E.A., Grouse,L.H., Derge,J.G., Klausner,R.D., Collins,F.S., Wagner,L., Shenmen,C.M., Schuler,G.D., Altschul,S.F., Zeeberg,B., Buetow,K.H., Schaefer,C.F., Bhat,N.K., Hopkins,R.F., Jordan,H., Moore,T., Max,S.I., Wang,J., Hsieh,F., Diatchenko,L., Marusina,K., Farmer,A.A., Rubin,G.M., Hong,L., Stapleton,M., Soares,M.B., Bonaldo,M.F., Casavant,T.L., Scheetz,T.E., Brownstein,M.J., Usdin,T.B., Toshiyuki,S., Carninci,P., Prange,C., Raha,S.S., Loquellano,N.A., Peters,G.J., Abramson,R.D., Mullahy,S.J., Bosak,S.A., McEwan,P.J., McKernan,K.J., Malek,J.A., Gunaratne,P.H., Richards,S., Worley,K.C., Hale,S., Garcia,A.M., Gay,L.J., Hulyk,S.W., Villalon,D.K., Muzny,D.M., Sodergren,E.J., Lu,X., Gibbs,R.A., Fahey,J., Helton,E., Ketteman,M., Madan,A., Rodrigues,S., Sanchez,A., Whiting,M., Madan,A., Young,A.C., Shevchenko,Y., Bouffard,G.G., Blakesley,R.W., Touchman,J.W., Green,E.D., Dickson,M.C., Rodriguez,A.C., Grimwood,J., Schmutz,J., Myers,R.M., Butterfield,Y.S., Krzywinski,M.I., Skalska,U., Smailus,D.E., Schnerch,A., Schein,J.E., Jones,S.J. and Marra,M.A. CONSRTM Mammalian Gene Collection Program Team TITLE Generation and initial analysis of more than 15,000 full-length human and mouse cDNA sequences JOURNAL Proc. Natl. Acad. Sci. U.S.A. 99 (26), 16899-16903 (2002) PUBMED 12477932 REFERENCE 2 (bases 1 to 3005) CONSRTM NIH MGC Project TITLE Direct Submission JOURNAL Submitted (27-MAR-2001) National Institutes of Health, Mammalian Gene Collection (MGC), Bethesda, MD 20892-2590, USA REMARK NIH-MGC Project URL: http://mgc.nci.nih.gov COMMENT Contact: MGC help desk Email: cgapbs-r@mail.nih.gov Tissue Procurement: Gilbert Smith, Ph.D. cDNA Library Preparation: Life Technologies, Inc. cDNA Library Arrayed by: The I.M.A.G.E. Consortium (LLNL) DNA Sequencing by: Sequencing Group at the Stanford Human Genome Center, Stanford University School of Medicine, Stanford, CA 94305 Web site: http://www-shgc.stanford.edu Contact: (Dickson, Mark) mcd@paxil.stanford.edu Dickson, M., Schmutz, J., Grimwood, J., Rodriquez, A., and Myers, R. M. Clone distribution: MGC clone distribution information can be found through the I.M.A.G.E. Consortium/LLNL at: http://image.llnl.gov Series: IRAK Plate: 8 Row: d Column: 2 This clone was selected for full length sequencing because it passed the following selection criteria: matched mRNA gi: 31543314. FEATURES Location/Qualifiers source 1..3005 /organism="Mus musculus" /mol_type="mRNA" /strain="Czech II" /db_xref="taxon:10090" /clone="MGC:6363 IMAGE:3495665" /tissue_type="Mammary tumor metastatized to lung. Tumor arose spontaneously from a senescent normal mammary (clonal) outgrowth infected with the virus MMTV." /clone_lib="NCI_CGAP_Lu29" /lab_host="DH10B" /note="Vector: pCMV-SPORT6" gene 1..3005 /gene="Ncl" /gene_synonym="C23" /gene_synonym="D0Nds28" /gene_synonym="D1Nds28" /gene_synonym="Nucl" /db_xref="GeneID:17975" /db_xref="MGI:MGI:97286" CDS 53..2176 /gene="Ncl" /gene_synonym="C23" /gene_synonym="D0Nds28" /gene_synonym="D1Nds28" /gene_synonym="Nucl" /codon_start=1 /product="nucleolin" /protein_id="AAH05460.1" /db_xref="GeneID:17975" /db_xref="MGI:MGI:97286" /translation="MVKLAKAGKTHGEAKKMAPPPKEVEEDSEDEEMSEDEDDSSGEE EVVIPQKKGKKATTTPAKKVVVSQTKKAAVPTPAKKAAVTPGKKAVATPAKKNITPAK VIPTPGKKGAAQAKALVPTPGKKGAATPAKGAKNGKNAKKEDSDEDEDEEDEEDSDED EDDEEEDEFEPPIVKGVKPAKAAPAAPASEDEEDDEDEDDEEEEDEEEEDDSEEEVME ITTAKGKKTPAKVVPMKAKSVAEEEDEEEEDEDDEDEDDEEEDDEDDDEEEEEEEPVK AAPGKRKKEMTKQKEAPEAKKQKVEGSEPTTPFNLFIGNLNPNKSVNELKFAISELFA KNDLAVVDVRTGTNRKFGYVDFESAEDLEKALELTGLKVFGNEIKLEKPKGRDSKKVR AARTLLAKNLSFNITEDELKEVFEDAMEIRLVSQDGKSKGIAYIEFKSEADAEKNLEE KQGAEIDGRSVSLYYTGEKGQRQERTGKTSTWSGESKTLVLSNLSYSATKETLEEVFE KATFIKVPQNPHGKPKGYAFIEFASFEDAKEALNSCNKMEIEGRTIRLELQGSNSRSQ PSKTLFVKGLSEDTTEETLKESFEGSVRARIVTDRETGSSKGFGFVDFNSEEDAKAAK EAMEDGEIDGNKVTLDWAKPKGEGGFGGRGGGRGGFGGRGGGRGGRGGFGGRGRGGFG GRGGFRGGRGGGGDFKPQGKKTKFE" BASE COUNT 1029 a 523 c 809 g 644 t ORIGIN 1 gctcttccga gctgctcgct ctccacacgc gccgccgccg taatccgcca ccatggtgaa 61 gctcgcaaag gctggcaaaa cccacggtga ggccaagaaa atggctcctc ctccaaagga 121 ggtggaagag gatagtgaag atgaagaaat gtcagaagat gaagatgaca gcagtggaga 181 agaggaggtt gtcatccctc agaaaaaagg caaaaaggct accacaaccc cagcaaagaa 241 ggtggttgtt tcacaaacaa aaaaggctgc agttcccaca ccagctaaga aagcagctgt 301 gaccccaggc aaaaaggcag tagccacacc agctaagaaa aacattacac cagccaaagt 361 cattccaaca ccgggtaaga agggagctgc acaagcaaaa gcgttggtac caactcctgg 421 taaaaaggga gctgccactc cagctaaggg ggctaagaac ggtaagaatg ccaagaagga 481 agacagtgat gaggatgaag atgaagagga tgaagaagat agcgatgagg atgaagatga 541 tgaggaagag gatgagtttg agccaccaat agtaaaagga gtgaagccag caaaagcagc 601 tcctgctgct cctgcctccg aggatgagga agatgatgag gatgaagatg atgaggaaga 661 ggaagatgaa gaagaggaag atgactctga ggaagaagtt atggagatca caacagccaa 721 aggaaagaaa actcctgcaa aagttgttcc tatgaaagcc aagagtgtgg ctgaggagga 781 ggatgaggag gaagaggatg aagatgacga ggatgaggat gatgaggaag aggatgacga 841 agatgatgat gaggaagaag aggaggaaga acctgttaaa gcagcacctg gaaaacggaa 901 gaaggagatg accaagcaga aagaagcccc tgaagccaag aaacagaaag tagaaggctc 961 agaaccaact acacctttca atctgttcat tggaaacctt aatccaaaca agtctgttaa 1021 tgaattaaaa tttgccatca gtgaactttt tgctaaaaat gatcttgctg ttgtggatgt 1081 cagaactggt acaaatagga aatttggtta tgtggacttt gagtctgctg aagacctaga 1141 aaaggccttg gagctcactg gtttaaaagt gtttggcaat gaaattaaac tagaaaaacc 1201 aaaaggaaga gatagtaaga aagttcgagc tgcaagaaca cttctagcca aaaacctctc 1261 tttcaacatc actgaggatg aattaaagga agtgtttgaa gacgccatgg agatcagatt 1321 agtcagccag gatgggaaaa gtaaagggat tgcttatatt gaatttaagt ctgaagctga 1381 tgcagagaaa aatttggaag aaaagcaggg ggcagaaatt gatggacgat ctgtttcact 1441 ctactatact ggagagaaag gtcaaaggca agagagaact ggaaagacca gcacttggag 1501 tggtgaatca aagactttgg ttttaagtaa cctttcctac agtgcaacaa aagaaactct 1561 tgaggaagta tttgagaaag caacttttat caaagtgccc cagaacccac atggcaaacc 1621 taaagggtat gcatttatag aatttgcttc atttgaagat gctaaagaag ctttaaattc 1681 ctgtaataaa atggaaattg agggcagaac aatcaggctg gagttgcaag gatccaattc 1741 gagaagtcaa ccatccaaaa ctctgtttgt caaaggtctg tctgaggata ccactgaaga 1801 gaccttaaaa gaatcatttg agggctctgt tcgtgcaaga atagtcactg atcgggaaac 1861 tggttcttcc aaagggtttg gttttgtaga ctttaatagt gaggaagatg ccaaagctgc 1921 caaggaggcc atggaagatg gagaaattga cggaaacaaa gttaccttgg actgggccaa 1981 acctaagggt gaaggtggct ttggtggtcg aggtggaggc agaggaggtt tcggaggcag 2041 aggtggaggc agaggtggaa gaggtggatt tggaggaaga ggccggggag gctttggagg 2101 tagaggaggc ttccgaggcg gcagaggagg agggggagac ttcaagccac aaggaaagaa 2161 gacgaagttt gaatagttcc ttccatccca ttctttccct cttcatttta aagaaaggac 2221 tctggggttt ttactctgtt acctgttcaa tgacagagcc ttctaaggac attccaagac 2281 agtaaagatc ctaaactctg ttgccagact taatacttcc tagaggttac atttggattg 2341 ttgcttaaga gcttggcaag accaactctg cccagtggga atttcagttg tgttcctact 2401 gctttcaaga attcccagct acaaatgtgg aaattggtgg ggaacagctt catcatgatt 2461 ctgatctgga agatttaatt tgtatcttag aagggtgtgt actggaaaag tggttgatag 2521 agcacatgga tcagtgctgg aaataccata caagagcttg tgtggtatgt aattctattc 2581 ccagcataat aagaaaaaac agtacagtgc aatctgaaat gacctggaca aggaatggta 2641 ccccattggg ttgaaaaatt cacatagtca ggatggttgc acatgccttt aaccccagca 2701 cttgggaggg agaggctggt agatctgagt ttgatctgat gtacagagag ttccagaaca 2761 gccagggctg tttattagag aaaaaaccct gtcttgaaaa aacaagaaaa aaaaacctca 2821 cagacaacca aatacagagt tttagccact gagtaccaag tctcagcagc aagctgggag 2881 tgacgtaatc caatcccatg ggaggctaaa gcagtctatg acttcaatgc cagttgggtc 2941 tgcagaactg agttgctgga tagtgaggga tacatagaaa ctttgtcttg aaaaaaaaaa 3001 aaaaa //